Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq75383 84.2 2e-11 >seq75383 Length=1910755 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || |||| |||| |||| ||||| || || || || || | || ||| || Sbjct 168992 CGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 168933 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||| ||||||||| |||| || || | |||||| || | ||| | ||||||||| Sbjct 168932 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTT 168873 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCCACGTCCAAAGTAA 39682 || ||| || || | || | | ||||| | ||| |||| |||| ||| | Sbjct 168872 TCTTGTATCTTCACCTTGACATTCTCGATGGTGTCACTCGGCT--CCACCTCCAGAGTGA 168815 Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||||||| || | || ||||| ||||||||||| Sbjct 168814 TGGTTTTACCAGTGAGGGTCTTTACAAAGATCTGCAT 168778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347042260599560