Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq39996 95.1 2e-14
>seq39996
Length=45000
Score = 95.1 bits (104), Expect = 2e-14
Identities = 253/376 (67%), Gaps = 8/376 (2%)
Strand=Plus/Plus
Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937
|| || ||| || || ||||| || || || || ||| ||||| | ||| || ||
Sbjct 6571 GACCTGACGGTCGAAACGACCGGGACGCAGAAGTGCGGGGTCAAGAACGTCAGGACGGTT 6630
Query 15938 CGTTGCGGCGATGACAACAATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAA 15996
|| |||||||||| | || ||| |||| || || || ||||| || || |
Sbjct 6631 GGTGGCGGCGATGAGGATGATGCCTTCATTCGCC-TCGAAGCCGTCCATTTCGACCAGCA 6689
Query 15997 GCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT-ACCACCAGCACTGCGTTGC 16055
||||||| | || ||||| || || || || | | || | ||| || | || ||
Sbjct 6690 GCTGGTTCAGCGTCTGTTCGCGCTCGTCGTTACC-GCCACCAAGACCGGCGCCACGATGG 6748
Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGAC 16114
|| ||||| || || || || ||||||| |||||| ||| ||| ||| | ||
Sbjct 6749 CGGCCGACGGCGTCGATTTCGTCGATGAAGATGATGCAGGGTGCATTCTTCTTG-GCTTG 6807
Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174
|| || | || || || || | ||||| || || || ||||| ||||| |||| |
Sbjct 6808 CTCGAACATGTCACGCACGCGGCTTGCGCCGACGCCGACGAACATTTCCACGAAGTCCGA 6867
Query 16175 GGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233
||||| || | || ||| || ||||| | |||||| || | || || || ||||| |
Sbjct 6868 ACCGGAA-ATGGTGAAGAACGGCACATTGGCTTCACCGGCGACGGAACGCGCCAGAAGCG 6926
Query 16234 TCTTACCCGTACCTGG 16249
||||||||||||| ||
Sbjct 6927 TCTTACCCGTACCGGG 6942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620142452470400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |