Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq66703 84.2 3e-11 >seq66703 Length=1304 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 198858 ACCATATACATTACCCATATCATCCTCACCTTTTCGGTTTGGATTAATCAGCCATGCTTT 198917 |||||| || ||||||||||||| |||||| || | |||||| | ||| |||| Sbjct 449 ACCATAAACTCGGCCCATATCATCCTTACCTTTACGATAAGGATTAGCTAACCAAGCTTC 390 Query 198918 GGTTTCATTTGCGTTAGCGTCCCATGTACGAGTACCAAGATCCCTAAACTGTTTTGCACT 198977 ||||||| || ||||||| ||||||| | |||| | | | |||||| ||| || Sbjct 389 ATTTTCATTGGCATTAGCGTTCCATGTATTACATCCAATAGCTCGAAACTGAGCTGCGCT 330 Query 198978 GGTATAACCACGAAGATAACCAATAAATTCCGCAAT 199013 ||||||||| ||||| || | ||||| || || Sbjct 329 ATCATAACCACGTAGATACCCTAATAATTCTGCGAT 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751877407460800