Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_015266.1
Length=40555
Score E
Sequences producing significant alignments: (Bits) Value
seq70400 109 1e-19
>seq70400
Length=74324
Score = 109 bits (120), Expect = 1e-19
Identities = 283/423 (67%), Gaps = 15/423 (4%)
Strand=Plus/Plus
Query 35784 CAACGTTTGCAAGATAACGGCAAAAGTGTTGCCTTTATCGTGC--GACAACAAATTCTTC 35841
|||| ||| || ||| || | || |||| || |||||||| ||||| | ||||||
Sbjct 29301 CAACTTTTTCATGATTACTTCGAATGTGTGACCCTTATCGTGATTGACAAGA--TTCTTC 29358
Query 35842 ACGTTTTCCAACACGAAGGCCGCAGGTCGCTTCGCTGCGATGATCCGGGCTACGTCGAAA 35901
||||| || | | |||||| || | | | |||||| || || || || ||
Sbjct 29359 ACGTTCTCAAGTAGAAAGGCCTTGGGCTGGTGATGTTTGATGATGCGTGCGACATCAAAG 29418
Query 35902 AATAGAGTGCCCTGAGTAGTGCACTCGAAGCCGTGCGGGCGGCCCAGTGAGTTCTTTTTG 35961
|| ||||| ||||| || | | |||||||||| | ||||||| | |||||| ||
Sbjct 29419 AAAAGAGTTCCCTGCGTCTCGTCCGCGAAGCCGTGGGCACGGCCCAAGGCGTTCTTCTTA 29478
Query 35962 CTTACTCCCGCGATACTAAACGGCTGGCAAGGGAAGCCGGCAAGCAAGACGTCATGAGTT 36021
||||| || |||||||| ||||||||||| || || || || || || | ||| || |
Sbjct 29479 CTTACGCCGGCGATACTGAACGGCTGGCAGGGAAATCCTGCCAGTAAAATGTCGTGTGCC 29538
Query 36022 GGCACACTTTCGGCCG---CGAATGGGACGATGTCACCGATGAAAGGATGATGGTCGC-- 36076
|| | | ||||| | ||| | ||||||||| ||| ||||| |||||
Sbjct 29539 GGGA---TGTCGGCAGCGTCGACTTTCGTGATGTCACCTTTGACTTCATGATCGTCGCAG 29595
Query 36077 CGA-AGTTATCGACGTACGTCTTCTTCGAAAAGTCGTTCCACTCGCTAGTGAATACGCAT 36135
||| | || | ||| || || ||| | | | ||| || || || ||||||
Sbjct 29596 CGATAATTCGCCTTGTAAGTTGCCTGTGAATATTTATCCCATTCTGAGGTAAAAACGCAT 29655
Query 36136 TCACCGCC-ATGAGCCTCAAAACCAAGGCGAATGCCACCGATTCCGGCGAACAGATCGAT 36194
| || || ||| | || || ||| |||| | || |||||||| ||||| ||||| ||
Sbjct 29656 TTCCCACCGATGTG-GTCGAACCCACGGCGCAGTCCGCCGATTCCAGCGAATAGATCAAT 29714
Query 36195 GAA 36197
||
Sbjct 29715 AAA 29717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129535354571280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |