Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_015269.1
Length=118351
Score E
Sequences producing significant alignments: (Bits) Value
seq66703 233 1e-56
>seq66703
Length=1304
Score = 233 bits (258), Expect = 1e-56
Identities = 243/315 (77%), Gaps = 3/315 (1%)
Strand=Plus/Minus
Query 46143 ATGAGTGTGCATACATGGACGTAAGCAACCCTT-TGAGAACTCTCCCGGATTCCAGAAGG 46201
|||||| |||||||| |||||||| || ||| | ||| ||||| || ||||| ||||||
Sbjct 614 ATGAGTATGCATACAAGGACGTAAACATCCCATATGA-AACTCACCTGGATTGTAGAAGG 556
Query 46202 TTAGAATTTCCCCACGATCATCAATGCCCTTTTTCAGATTATGATAAATCTTGGCTAGTT 46261
|||||||||| || || |||||||| || ||| || |||| ||| ||||| || |
Sbjct 555 TTAGAATTTCACCTCGGTCATCAATACCGTTTCGCAAGTTATCATAGATCTTATGAAGCT 496
Query 46262 GGTCAAACATAAGACCATCGGAATTAGTCCACTGACGTCCTTGAACACCATAGACTCGTC 46321
|||||||| || | |||||| |||| || || || |||||||| ||||| |
Sbjct 495 GGTCAAACTCCTCTCCTACTGAATTACGCCACCTGCGCCCCTGTACACCATAAACTCGGC 436
Query 46322 CCATATCATCCTCACCTTTACGGTATGGATTGTCTAGCCAAGCTGAGTTTTCATTTGCAT 46381
|||||||||||| ||||||||| || ||||| ||| ||||||| |||||||| ||||
Sbjct 435 CCATATCATCCTTACCTTTACGATAAGGATTAGCTAACCAAGCTTCATTTTCATTGGCAT 376
Query 46382 TAGCATTCCATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCATACCCACGTA 46441
|||| |||||||| ||| |||||||| || || || ||||| ||||| |||||||
Sbjct 375 TAGCGTTCCATGTATTACATCCAATAGCTCGAAACTGAGCTGCGCTATCATAACCACGTA 316
Query 46442 GATACCC-AATCATT 46455
||||||| ||| |||
Sbjct 315 GATACCCTAATAATT 301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 378241632530240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |