Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq70604 221 1e-51 seq74433 206 2e-47 seq13228 206 2e-47 seq17826 150 1e-30 seq76194 132 4e-25 seq68779 122 7e-22 seq39809 118 9e-21 seq45446 96.9 3e-14 seq34609 95.1 1e-13 seq42836 93.3 3e-13 seq25926 87.8 1e-11 >seq70604 Length=2882449 Score = 221 bits (244), Expect = 1e-51 Identities = 370/530 (70%), Gaps = 4/530 (1%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| |||||| ||||| | || || | || || ||| Sbjct 2374725 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATAGAAAGGTGGAA 2374784 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| ||||| | || || || ||| Sbjct 2374785 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACT 2374844 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 ||| || | ||||||| ||||| | |||| | | ||||| ||||| || || Sbjct 2374845 GAATGATTGATCAGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACCAACACGGTT 2374904 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| ||||| | |||||| |||| ||| ||||| | ||| || | |||||| Sbjct 2374905 TTTGATGCCAAACGACTTATTGGATGAAGATTTGATGATGCTGTTGTCCAATCTGATATG 2374964 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 || |||||||| ||| | || |||| | |||| | ||| | || ||| || Sbjct 2374965 AAACATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCAAG-TAGAATA 2375023 Query 550298 GAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAAAT 550356 |||| | ||| | |||| | ||||| | | ||||| ||||| | | || || Sbjct 2375024 CAAGGGAGAGACAAAGAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCCTGACAAAGAT 2375083 Query 550357 GAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTAC 550415 ||| ||| || || | |||| |||| ||||| | || || | || |||| Sbjct 2375084 GAAGGAAATCGCAGAGGCCTACCTTGG-GAAGACTGTTACCAACGCTGTTGTCACAGTAC 2375142 Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 | || ||||| |||||||| || ||||| ||| | |||||||||||| ||||||||| | Sbjct 2375143 CTGCCTATTTCAATGACTCTCAGCGTCAGGCTGCCAAAGATGCTGGAACTATTGCTGGTC 2375202 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 | || || ||||| || |||||||| || ||||||||||| |||| ||| Sbjct 2375203 TCAACGTACTTCGAATCATCAATGAGCCAACTGCTGCTGCTATTGCCTAT 2375252 Score = 125 bits (138), Expect = 6e-23 Identities = 322/487 (66%), Gaps = 4/487 (1%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAA 552171 ||||| ||||| | |||||||| || || | || || || |||| |||| | | | Sbjct 2375688 CATGATATTGTCTTGGTTGGTGGCTCAACCCGCATCCCCAAGATTCA-GAAACTTCTCCA 2375746 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| || |||||| || || | ||| | || | || || |||||||||||||| Sbjct 2375747 GGACTTCTT-CAATGGGAAGGAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCAC 2375805 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 | ||||| || | || ||||| ||| | |||||| | | |||||| | ||| | Sbjct 2375806 ACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGACAAATCTGAAAATGTTCAAGACT 2375865 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | | || | ||||| |||||||| || ||||| | ||||| | ||| || | ||| Sbjct 2375866 TGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGG 2375925 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411 || || ||| | | || || || |||||| || | | | || | || | Sbjct 2375926 CTGTCCTCATCAAGTGTAACACCACCATTCCTACCAAGCAGACACAGACTTTCACCACCT 2375985 Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471 | | || || || ||| ||| ||||| ||| |||||| ||| | | || | Sbjct 2375986 ACCCTGACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAAGGTGAACGTGCCATGACCA 2376045 Query 552472 AAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAG 552531 | ||||| || | || || | ||| | | ||| || |||||||| || || || | Sbjct 2376046 AGGATAACAACCTGCTGGGCAAGTTTGAACTCACAGGCATACCTCCTGCCCCCCGGGGTG 2376105 Query 552532 TACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTT 552591 | || || |||||||| ||||| |||| ||||||||||| ||| | ||||| ||||| Sbjct 2376106 TTCCTCAGATTGAAGTCACTTTTCATATTGATGCCAATGGCATTCTCAATGTTTCTGCTG 2376165 Query 552592 GTGATAA 552598 ||||| Sbjct 2376166 TGGATAA 2376172 Score = 104 bits (114), Expect = 2e-16 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 1789371 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 1789428 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| | || ||||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 1789429 CCAGTTGCCTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 1789488 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAGAGTAACAGTT 563442 | || || ||||| || |||||||| | | | | || || ||||| | || Sbjct 1789489 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTGGAC-CTCAAGAGTGATGGTC 1789547 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || || || |||||||| ||||| Sbjct 1789548 TTCCCCGTTAGGGTCTTCACGAAAATCTGCAT 1789579 >seq74433 Length=1485305 Score = 206 bits (228), Expect = 2e-47 Identities = 392/572 (69%), Gaps = 4/572 (1%) Strand=Plus/Plus Query 550013 ACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGAT 550072 ||||| | | |||||| ||||| | || |||| || || ||||| |||||||||||| Sbjct 1446781 ACCACCTTTTCTTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAAATAATTGCCAATGAT 1446840 Query 550073 CAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGT 550132 || || ||| |||| || ||| ||||| | || || || ||| ||| || | | | Sbjct 1446841 CAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACTTAACGATTGATCGAT 1446900 Query 550133 GATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGT 550192 ||||| ||||| | |||| | | ||| | ||||| || |||||||||| ||||| Sbjct 1446901 GATGCTGCAAAGAACCAAGTCGCAATGAATTCCACCAACACGGTTTTTGATGCCAAACGA 1446960 Query 550193 TTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252 | |||||| ||| ||| ||||| | ||| || | |||||||| |||||||| ||| Sbjct 1446961 CTTATTGGACAAAGATTTGATGATGCTGTTGTCCAATCTGATATGAAACATTGGCCCTTC 1447020 Query 550253 CAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAA 550312 | || |||| | |||| | ||| | || || || |||| | ||| Sbjct 1447021 ATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCGAG-TAGAATACAAGGGAGAGACAAA 1447079 Query 550313 CAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAG 550371 | |||| | ||||| | | ||||| ||||| | | || ||||| ||| || Sbjct 1447080 GAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCCTGACAAAGATGAAGGAAATCGCAGA 1447139 Query 550372 TGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 || | |||| |||| ||||| |||| || || ||||| || |||||||||| Sbjct 1447140 GGCCTACCTTGG-GAAGACTGTTACCAATGCTGTTGCCACAGTACCTGCCTATTTTAATG 1447198 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 |||| || ||||| ||||| |||||||||||| ||| |||| || || | |||| | Sbjct 1447199 ACTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATCACTGGTCTCAACATACTTCAAA 1447258 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAG 550550 | |||||||| || ||||||||||| |||| ||||| | || ||| | || || Sbjct 1447259 TCATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGCTTAGACAAAAAGGTTGGAGCAG 1447318 Query 550551 AACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || ||||| || |||||||||| || ||| Sbjct 1447319 AAAGAAATGTGCTGATCTTTGATTTAGGTGGT 1447350 Score = 114 bits (126), Expect = 1e-19 Identities = 322/489 (66%), Gaps = 8/489 (2%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAA 552171 ||||| ||||| | |||||||| || | | || || || |||| |||| | | | Sbjct 1447738 CATGATATTGTTTTGGTTGGTGGCTCAATCCGCATCCCCAAGATTCA-GAAACTTCTCCA 1447796 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| || |||||| || || | ||| | || | || || |||||||||||||| Sbjct 1447797 GGACTTCTT-CAATGGGAAGGAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCAC 1447855 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 | ||||| || | || ||||| ||| | |||||| | | |||||| | ||| | Sbjct 1447856 ACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGACAAATCTGAAAATGTTCAAGACT 1447915 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | | || | ||||| |||||||| || ||||| | ||||| | ||| || | |||| Sbjct 1447916 TGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGA 1447975 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACG- 552410 || || ||| | | ||||| || |||||| || | | | | |||| || Sbjct 1447976 CTGTCCTCATCAAGCGTAATACCACCATTCCTACCAAGCAGACAC--AGACTTTCACCGC 1448033 Query 552411 -TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCAC 552469 || | || || || ||| ||| ||||| ||| |||||| ||| | || Sbjct 1448034 CTACCCTGACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAAGGTGAACATGCCATGAC 1448093 Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529 || ||||| || || || | ||| | || || |||||||| || || || Sbjct 1448094 CAAGGATAACAACATGCTGGGCAAGTTTGGACTCACAGCCATACCTCCTGCCCCCCGGGG 1448153 Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || || |||||||| ||||| ||||| ||||||||||| ||| | ||||| |||| Sbjct 1448154 TGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAATGGCATTCTCAATGTTTCTGC 1448213 Query 552590 TTGTGATAA 552598 | ||||| Sbjct 1448214 TGTGGATAA 1448222 >seq13228 Length=1472 Score = 206 bits (228), Expect = 2e-47 Identities = 392/572 (69%), Gaps = 4/572 (1%) Strand=Plus/Minus Query 550013 ACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGAT 550072 ||||| | | |||||| ||||| | || |||| || || ||||| |||||||||||| Sbjct 1013 ACCACCTTTTCTTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAAATAATTGCCAATGAT 954 Query 550073 CAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGT 550132 || || ||| |||| || ||| ||||| | || || || ||| ||| || | | | Sbjct 953 CAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACTTAACGATTGATCGAT 894 Query 550133 GATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGT 550192 ||||| ||||| | |||| | | ||| | ||||| || |||||||||| ||||| Sbjct 893 GATGCTGCAAAGAACCAAGTCGCAATGAATTCCACCAACACGGTTTTTGATGCCAAACGA 834 Query 550193 TTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252 | |||||| ||| ||| ||||| | ||| || | |||||||| |||||||| ||| Sbjct 833 CTTATTGGACAAAGATTTGATGATGCTGTTGTCCAATCTGATATGAAACATTGGCCCTTC 774 Query 550253 CAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAA 550312 | || |||| | |||| | ||| | || || || |||| | ||| Sbjct 773 ATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCGAG-TAGAATACAAGGGAGAGACAAA 715 Query 550313 CAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAG 550371 | |||| | ||||| | | ||||| ||||| | | || ||||| ||| || Sbjct 714 GAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCCTGACAAAGATGAAGGAAATCGCAGA 655 Query 550372 TGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 || | |||| |||| ||||| |||| || || ||||| || |||||||||| Sbjct 654 GGCCTACCTTGG-GAAGACTGTTACCAATGCTGTTGCCACAGTACCTGCCTATTTTAATG 596 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 |||| || ||||| ||||| |||||||||||| ||| |||| || || | |||| | Sbjct 595 ACTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATCACTGGTCTCAACATACTTCAAA 536 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAG 550550 | |||||||| || ||||||||||| |||| ||||| | || ||| | || || Sbjct 535 TCATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGCTTAGACAAAAAGGTTGGAGCAG 476 Query 550551 AACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || ||||| || |||||||||| || ||| Sbjct 475 AAAGAAATGTGCTGATCTTTGATTTAGGTGGT 444 >seq17826 Length=435311 Score = 150 bits (166), Expect = 1e-30 Identities = 370/552 (67%), Gaps = 12/552 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | || ||||| || ||||| || || | || | || || Sbjct 286453 GCCATCGGCATCGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCACGGCAAG 286394 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || || || ||| | ||||| || ||||| | ||||| Sbjct 286393 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACTACCCCCAGCTATGTGGCCTTCACC 286334 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168 || || || | | | || ||||| || || | || ||||| || ||||| Sbjct 286333 GATACAGAGCGGCTCATCGGCGATGCGGCCAAGAACCAGGTAGCCA-TG--AATCCCCAG 286277 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | |||||||| |||||| | || || |||| ||||||||| | || || Sbjct 286276 AACACTGTCTTTGATGCCAAACGTCTGATCGGCAGAAAATTTAATGATCCTGTCGTGCAA 286217 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA--TATTG 550286 |||||||||| | ||||||||||||| | | |||| || || || | || || Sbjct 286216 TCAGATATGAAACTTTGGCCTTTCCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAATG 286157 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | | || | |||| ||| |||| || || |||| || |||||||| Sbjct 286156 GTG-TCCT-ACAAAGGCGAAAAGAAAGCTTTTTATCCTGAGGAAATCTCTTCTATGGTAC 286099 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTA 550405 | | || ||||| | || || |||||| |||| | | | || || |||| || Sbjct 286098 TGACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCTACACTGTCACCAATGCTGTG 286040 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || ||||| ||||| || || |||||||| ||||| || || || || ||||| || | Sbjct 286039 ATCACTGTGCCAGCCTACTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTT 285980 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || || || || ||||| || | |||||||||||||| ||||||||||| |||| ||| Sbjct 285979 ATCGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACTGCTGCTGCCATTGCCTAT 285920 Query 550526 GGACTTGATAAA 550537 || | |||||| Sbjct 285919 GGCTTAGATAAA 285908 >seq76194 Length=1406810 Score = 132 bits (146), Expect = 4e-25 Identities = 326/490 (67%), Gaps = 7/490 (1%) Strand=Plus/Minus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAA 552171 ||||| ||||| | |||||||| || || | || || || |||| |||| | | | Sbjct 1346499 CATGATATTGTCTTGGTTGGTGGCTCAACCTGCATCCCCAAGATTCA-GAAACTTCTCCA 1346441 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| || |||||| || || ||||| | || | || || ||||||||||| || | Sbjct 1346440 GGACTTCTT-CAATGGGAAGGAACTAAATAAGAGCATCAACCCTGATGAGGCTGTCGCAT 1346382 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 | ||||| || | || ||||| ||| | |||||| | | |||||| | ||| | Sbjct 1346381 ACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGACAAATCTGAAAATGTTCAAGACT 1346322 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | | || | ||||| |||||||| || ||||| | ||||| | ||| || | |||| Sbjct 1346321 TGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGA 1346262 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411 || || ||| | | ||||| || |||||| || | | | || | || | Sbjct 1346261 CTGTCCTCATCAAGCGTAATACCACCATTCCTACCAAGCAGACACAGACTTTCACCACCT 1346202 Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471 | || || || || || ||| ||||| ||| |||||| ||| | | || | Sbjct 1346201 ACTCTGACAACCAGCCTAGTGTGCTCATTCAGGTTTATGAAGGTGAACGTGCCGTGACCA 1346142 Query 552472 AAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT---TCCTCCTGCTCCTCGTG 552528 | ||||| || | || || | ||| | | ||| || ||||||||| || || | Sbjct 1346141 AGGATAACAACCTGCTGGGCAAGTTTGAACTCACAGGCATACCTCCTCCTGCCCCCCGGG 1346082 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTG 552588 | || || || |||||||| ||||| ||||| |||||||| || ||| | ||||| ||| Sbjct 1346081 GTGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAAAGGCATTCTCAATGTTTCTG 1346022 Query 552589 CTTGTGATAA 552598 || ||||| Sbjct 1346021 CTGTGGATAA 1346012 >seq68779 Length=1714688 Score = 122 bits (134), Expect = 7e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || || | || ||||| || ||||| |||||||| || ||||| ||||| Sbjct 680690 GTTACCAACGCTGTTGTCACAGTACCTGCCTATTTCAATGACTCTCAGCGTCAGGCTACC 680749 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || || || ||||| || |||||||| || |||||| Sbjct 680750 AAAGATGCTGGAACTATTGCTGGTCTCAACGTACTTCGAATCATCAATGAGCCAACTGCT 680809 Query 550511 GCTGCACTTGCATATGG 550527 ||||| |||| ||||| Sbjct 680810 GCTGCTATTGCCTATGG 680826 Score = 107 bits (118), Expect = 2e-17 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| |||||| ||||| | || |||| ||||| ||| Sbjct 679856 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATGGAAAAGTGGAA 679915 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| ||||| | || || || ||| Sbjct 679916 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACT 679975 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 |||| || | |||||||| ||||| | |||| | | ||||| ||||| || || Sbjct 679976 GAACGATTGATCGGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACCAACACGGTT 680035 Query 550178 TTTG 550181 |||| Sbjct 680036 TTTG 680039 >seq39809 Length=6989 Score = 118 bits (130), Expect = 9e-21 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| |||||| ||||| | || |||| || || ||| Sbjct 210 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAA 151 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || | | |||| || ||| ||||| | || || || ||| Sbjct 150 ATAATTGCCAATGATCAGGGGAGCCGAACCACCCCAAGCTATGTCGCCTTTACTGATACT 91 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 |||| || | |||||||| ||||| | |||| || || ||||| ||||| || Sbjct 90 GAACGATTGATCGGTGATGCTGCAAAGAACCAAGTTGCAATG--AATCCCACCAACACGG 33 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAG 550206 |||||||||| ||||| | |||||| |||| Sbjct 32 TTTTTGATGCCAAACGACTTATTGGACGAAG 2 >seq45446 Length=1454406 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||||||||| ||||| | ||||| || || || Sbjct 650330 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACG 650389 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| |||||||||| | ||||| | | || |||||||| || Sbjct 650390 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 650442 >seq34609 Length=2775773 Score = 95.1 bits (104), Expect = 1e-13 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 563269 AGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||||||| || ||| |||| ||| ||||| |||| | ||| | | |||||| | Sbjct 2545736 AGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTTCCA 2545793 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||| || || |||| || ||||||||||| ||||||||||||||||| ||||| || | Sbjct 2545794 GTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGA 2545853 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTAC 563446 | || ||||| || |||||||| | | | || ||||| | || || | Sbjct 2545854 TCTTGGCCTTTACATTTTCTATTGTATCTGAGGGCTCGACCTCAAGAGTGATGGTCTTCC 2545913 Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || | |||||| ||||| Sbjct 2545914 CTGTCAGGGTCTTCATGAAAATCTGCAT 2545941 >seq42836 Length=1893264 Score = 93.3 bits (102), Expect = 3e-13 Identities = 134/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| ||||| |||| | ||| | | |||||| | ||| || || ||||| || ||||| Sbjct 1011567 AATGTTGTAGTCAGACAAAGTACGTCCATCTTCCACTTGCTTCCCAGCAAAGATCAGTCT 1011508 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||| ||||||||||||||||| ||||| || || || |||| | || ||||| Sbjct 1011507 TTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCATTACATCTTCTATTGT 1011448 Query 563412 ATCAGTGTG-AGTACATTCGAGAGTAACAGTTTTACCAGT-AAGAGTTTTAACGAAAATT 563469 || | | | || || |||||| | || || || || |||||| || || ||||| Sbjct 1011447 TTCCGAGGGCTCGACCTT-GAGAGTGATGGTCTTCCCTGTCAAGAGTCTTCACAAAAATC 1011389 Query 563470 TGCAT 563474 ||||| Sbjct 1011388 TGCAT 1011384 >seq25926 Length=4460019 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| ||| | |||| | ||| | | |||||| ||||| || || ||||| || ||||| Sbjct 2859514 AATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 2859573 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||| ||||||||||||||||| ||||| || || || ||||| || |||| Sbjct 2859574 TTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGT 2859633 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||| | | | || ||||| | || || | || || || || |||||||| || Sbjct 2859634 ATCCGAGGGCTCGACCTCAAGAGTGATGGTCTTCCTCGTCAGGGTCTTCACGAAAATCTG 2859693 Query 563472 CAT 563474 ||| Sbjct 2859694 CAT 2859696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4025206969686800