Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq70604 221 1e-51
seq74433 206 2e-47
seq13228 206 2e-47
seq17826 150 1e-30
seq76194 132 4e-25
seq68779 122 7e-22
seq39809 118 9e-21
seq45446 96.9 3e-14
seq34609 95.1 1e-13
seq42836 93.3 3e-13
seq25926 87.8 1e-11
>seq70604
Length=2882449
Score = 221 bits (244), Expect = 1e-51
Identities = 370/530 (70%), Gaps = 4/530 (1%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||| | || ||||| ||| |||||| ||||| | || || | || || |||
Sbjct 2374725 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATAGAAAGGTGGAA 2374784
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| |||||||||||||| || ||| |||| || ||| ||||| | || || || |||
Sbjct 2374785 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACT 2374844
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177
||| || | ||||||| ||||| | |||| | | ||||| ||||| || ||
Sbjct 2374845 GAATGATTGATCAGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACCAACACGGTT 2374904
Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237
|||||||| ||||| | |||||| |||| ||| ||||| | ||| || | ||||||
Sbjct 2374905 TTTGATGCCAAACGACTTATTGGATGAAGATTTGATGATGCTGTTGTCCAATCTGATATG 2374964
Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297
|| |||||||| ||| | || |||| | |||| | ||| | || ||| ||
Sbjct 2374965 AAACATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCAAG-TAGAATA 2375023
Query 550298 GAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAAAT 550356
|||| | ||| | |||| | ||||| | | ||||| ||||| | | || ||
Sbjct 2375024 CAAGGGAGAGACAAAGAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCCTGACAAAGAT 2375083
Query 550357 GAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTAC 550415
||| ||| || || | |||| |||| ||||| | || || | || ||||
Sbjct 2375084 GAAGGAAATCGCAGAGGCCTACCTTGG-GAAGACTGTTACCAACGCTGTTGTCACAGTAC 2375142
Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475
| || ||||| |||||||| || ||||| ||| | |||||||||||| ||||||||| |
Sbjct 2375143 CTGCCTATTTCAATGACTCTCAGCGTCAGGCTGCCAAAGATGCTGGAACTATTGCTGGTC 2375202
Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525
| || || ||||| || |||||||| || ||||||||||| |||| |||
Sbjct 2375203 TCAACGTACTTCGAATCATCAATGAGCCAACTGCTGCTGCTATTGCCTAT 2375252
Score = 125 bits (138), Expect = 6e-23
Identities = 322/487 (66%), Gaps = 4/487 (1%)
Strand=Plus/Plus
Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAA 552171
||||| ||||| | |||||||| || || | || || || |||| |||| | | |
Sbjct 2375688 CATGATATTGTCTTGGTTGGTGGCTCAACCCGCATCCCCAAGATTCA-GAAACTTCTCCA 2375746
Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231
| ||| || |||||| || || | ||| | || | || || ||||||||||||||
Sbjct 2375747 GGACTTCTT-CAATGGGAAGGAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCAC 2375805
Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291
| ||||| || | || ||||| ||| | |||||| | | |||||| | ||| |
Sbjct 2375806 ACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGACAAATCTGAAAATGTTCAAGACT 2375865
Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351
| | || | ||||| |||||||| || ||||| | ||||| | ||| || | |||
Sbjct 2375866 TGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGG 2375925
Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411
|| || ||| | | || || || |||||| || | | | || | || |
Sbjct 2375926 CTGTCCTCATCAAGTGTAACACCACCATTCCTACCAAGCAGACACAGACTTTCACCACCT 2375985
Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471
| | || || || ||| ||| ||||| ||| |||||| ||| | | || |
Sbjct 2375986 ACCCTGACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAAGGTGAACGTGCCATGACCA 2376045
Query 552472 AAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAG 552531
| ||||| || | || || | ||| | | ||| || |||||||| || || || |
Sbjct 2376046 AGGATAACAACCTGCTGGGCAAGTTTGAACTCACAGGCATACCTCCTGCCCCCCGGGGTG 2376105
Query 552532 TACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTT 552591
| || || |||||||| ||||| |||| ||||||||||| ||| | ||||| |||||
Sbjct 2376106 TTCCTCAGATTGAAGTCACTTTTCATATTGATGCCAATGGCATTCTCAATGTTTCTGCTG 2376165
Query 552592 GTGATAA 552598
|||||
Sbjct 2376166 TGGATAA 2376172
Score = 104 bits (114), Expect = 2e-16
Identities = 153/212 (72%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323
|| |||||||| || ||| |||| ||| ||||| |||| | ||| | | |||||
Sbjct 1789371 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 1789428
Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383
| ||||| | || ||||| || ||||||||||| ||||||||||||||||| ||||| |
Sbjct 1789429 CCAGTTGCCTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 1789488
Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAGAGTAACAGTT 563442
| || || ||||| || |||||||| | | | | || || ||||| | ||
Sbjct 1789489 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTGGAC-CTCAAGAGTGATGGTC 1789547
Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || || || || || |||||||| |||||
Sbjct 1789548 TTCCCCGTTAGGGTCTTCACGAAAATCTGCAT 1789579
>seq74433
Length=1485305
Score = 206 bits (228), Expect = 2e-47
Identities = 392/572 (69%), Gaps = 4/572 (1%)
Strand=Plus/Plus
Query 550013 ACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGAT 550072
||||| | | |||||| ||||| | || |||| || || ||||| ||||||||||||
Sbjct 1446781 ACCACCTTTTCTTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAAATAATTGCCAATGAT 1446840
Query 550073 CAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGT 550132
|| || ||| |||| || ||| ||||| | || || || ||| ||| || | | |
Sbjct 1446841 CAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACTTAACGATTGATCGAT 1446900
Query 550133 GATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGT 550192
||||| ||||| | |||| | | ||| | ||||| || |||||||||| |||||
Sbjct 1446901 GATGCTGCAAAGAACCAAGTCGCAATGAATTCCACCAACACGGTTTTTGATGCCAAACGA 1446960
Query 550193 TTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252
| |||||| ||| ||| ||||| | ||| || | |||||||| |||||||| |||
Sbjct 1446961 CTTATTGGACAAAGATTTGATGATGCTGTTGTCCAATCTGATATGAAACATTGGCCCTTC 1447020
Query 550253 CAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAA 550312
| || |||| | |||| | ||| | || || || |||| | |||
Sbjct 1447021 ATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCGAG-TAGAATACAAGGGAGAGACAAA 1447079
Query 550313 CAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAG 550371
| |||| | ||||| | | ||||| ||||| | | || ||||| ||| ||
Sbjct 1447080 GAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCCTGACAAAGATGAAGGAAATCGCAGA 1447139
Query 550372 TGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430
|| | |||| |||| ||||| |||| || || ||||| || ||||||||||
Sbjct 1447140 GGCCTACCTTGG-GAAGACTGTTACCAATGCTGTTGCCACAGTACCTGCCTATTTTAATG 1447198
Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490
|||| || ||||| ||||| |||||||||||| ||| |||| || || | |||| |
Sbjct 1447199 ACTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATCACTGGTCTCAACATACTTCAAA 1447258
Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAG 550550
| |||||||| || ||||||||||| |||| ||||| | || ||| | || ||
Sbjct 1447259 TCATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGCTTAGACAAAAAGGTTGGAGCAG 1447318
Query 550551 AACTTAATGTACTCATCTTTGATTGTGGAGGT 550582
|| ||||| || |||||||||| || |||
Sbjct 1447319 AAAGAAATGTGCTGATCTTTGATTTAGGTGGT 1447350
Score = 114 bits (126), Expect = 1e-19
Identities = 322/489 (66%), Gaps = 8/489 (2%)
Strand=Plus/Plus
Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAA 552171
||||| ||||| | |||||||| || | | || || || |||| |||| | | |
Sbjct 1447738 CATGATATTGTTTTGGTTGGTGGCTCAATCCGCATCCCCAAGATTCA-GAAACTTCTCCA 1447796
Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231
| ||| || |||||| || || | ||| | || | || || ||||||||||||||
Sbjct 1447797 GGACTTCTT-CAATGGGAAGGAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCAC 1447855
Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291
| ||||| || | || ||||| ||| | |||||| | | |||||| | ||| |
Sbjct 1447856 ACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGACAAATCTGAAAATGTTCAAGACT 1447915
Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351
| | || | ||||| |||||||| || ||||| | ||||| | ||| || | ||||
Sbjct 1447916 TGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGA 1447975
Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACG- 552410
|| || ||| | | ||||| || |||||| || | | | | |||| ||
Sbjct 1447976 CTGTCCTCATCAAGCGTAATACCACCATTCCTACCAAGCAGACAC--AGACTTTCACCGC 1448033
Query 552411 -TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCAC 552469
|| | || || || ||| ||| ||||| ||| |||||| ||| | ||
Sbjct 1448034 CTACCCTGACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAAGGTGAACATGCCATGAC 1448093
Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529
|| ||||| || || || | ||| | || || |||||||| || || ||
Sbjct 1448094 CAAGGATAACAACATGCTGGGCAAGTTTGGACTCACAGCCATACCTCCTGCCCCCCGGGG 1448153
Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589
|| || || |||||||| ||||| ||||| ||||||||||| ||| | ||||| ||||
Sbjct 1448154 TGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAATGGCATTCTCAATGTTTCTGC 1448213
Query 552590 TTGTGATAA 552598
| |||||
Sbjct 1448214 TGTGGATAA 1448222
>seq13228
Length=1472
Score = 206 bits (228), Expect = 2e-47
Identities = 392/572 (69%), Gaps = 4/572 (1%)
Strand=Plus/Minus
Query 550013 ACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGAT 550072
||||| | | |||||| ||||| | || |||| || || ||||| ||||||||||||
Sbjct 1013 ACCACCTTTTCTTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAAATAATTGCCAATGAT 954
Query 550073 CAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGT 550132
|| || ||| |||| || ||| ||||| | || || || ||| ||| || | | |
Sbjct 953 CAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACTTAACGATTGATCGAT 894
Query 550133 GATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGT 550192
||||| ||||| | |||| | | ||| | ||||| || |||||||||| |||||
Sbjct 893 GATGCTGCAAAGAACCAAGTCGCAATGAATTCCACCAACACGGTTTTTGATGCCAAACGA 834
Query 550193 TTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252
| |||||| ||| ||| ||||| | ||| || | |||||||| |||||||| |||
Sbjct 833 CTTATTGGACAAAGATTTGATGATGCTGTTGTCCAATCTGATATGAAACATTGGCCCTTC 774
Query 550253 CAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAA 550312
| || |||| | |||| | ||| | || || || |||| | |||
Sbjct 773 ATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCGAG-TAGAATACAAGGGAGAGACAAA 715
Query 550313 CAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAG 550371
| |||| | ||||| | | ||||| ||||| | | || ||||| ||| ||
Sbjct 714 GAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCCTGACAAAGATGAAGGAAATCGCAGA 655
Query 550372 TGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430
|| | |||| |||| ||||| |||| || || ||||| || ||||||||||
Sbjct 654 GGCCTACCTTGG-GAAGACTGTTACCAATGCTGTTGCCACAGTACCTGCCTATTTTAATG 596
Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490
|||| || ||||| ||||| |||||||||||| ||| |||| || || | |||| |
Sbjct 595 ACTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATCACTGGTCTCAACATACTTCAAA 536
Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAG 550550
| |||||||| || ||||||||||| |||| ||||| | || ||| | || ||
Sbjct 535 TCATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGCTTAGACAAAAAGGTTGGAGCAG 476
Query 550551 AACTTAATGTACTCATCTTTGATTGTGGAGGT 550582
|| ||||| || |||||||||| || |||
Sbjct 475 AAAGAAATGTGCTGATCTTTGATTTAGGTGGT 444
>seq17826
Length=435311
Score = 150 bits (166), Expect = 1e-30
Identities = 370/552 (67%), Gaps = 12/552 (2%)
Strand=Plus/Minus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
|| || || || || | || ||||| || ||||| || || | || | || ||
Sbjct 286453 GCCATCGGCATCGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCACGGCAAG 286394
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
|| || || || ||||| || || || ||| | ||||| || ||||| | |||||
Sbjct 286393 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACTACCCCCAGCTATGTGGCCTTCACC 286334
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168
|| || || | | | || ||||| || || | || ||||| || |||||
Sbjct 286333 GATACAGAGCGGCTCATCGGCGATGCGGCCAAGAACCAGGTAGCCA-TG--AATCCCCAG 286277
Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228
|| ||| | |||||||| |||||| | || || |||| ||||||||| | || ||
Sbjct 286276 AACACTGTCTTTGATGCCAAACGTCTGATCGGCAGAAAATTTAATGATCCTGTCGTGCAA 286217
Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA--TATTG 550286
|||||||||| | ||||||||||||| | | |||| || || || | || ||
Sbjct 286216 TCAGATATGAAACTTTGGCCTTTCCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAATG 286157
Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346
| | || | |||| ||| |||| || || |||| || ||||||||
Sbjct 286156 GTG-TCCT-ACAAAGGCGAAAAGAAAGCTTTTTATCCTGAGGAAATCTCTTCTATGGTAC 286099
Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTA 550405
| | || ||||| | || || |||||| |||| | | | || || |||| ||
Sbjct 286098 TGACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCTACACTGTCACCAATGCTGTG 286040
Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465
|| ||||| ||||| || || |||||||| ||||| || || || || ||||| || |
Sbjct 286039 ATCACTGTGCCAGCCTACTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTT 285980
Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525
|| || || || ||||| || | |||||||||||||| ||||||||||| |||| |||
Sbjct 285979 ATCGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACTGCTGCTGCCATTGCCTAT 285920
Query 550526 GGACTTGATAAA 550537
|| | ||||||
Sbjct 285919 GGCTTAGATAAA 285908
>seq76194
Length=1406810
Score = 132 bits (146), Expect = 4e-25
Identities = 326/490 (67%), Gaps = 7/490 (1%)
Strand=Plus/Minus
Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAA 552171
||||| ||||| | |||||||| || || | || || || |||| |||| | | |
Sbjct 1346499 CATGATATTGTCTTGGTTGGTGGCTCAACCTGCATCCCCAAGATTCA-GAAACTTCTCCA 1346441
Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231
| ||| || |||||| || || ||||| | || | || || ||||||||||| || |
Sbjct 1346440 GGACTTCTT-CAATGGGAAGGAACTAAATAAGAGCATCAACCCTGATGAGGCTGTCGCAT 1346382
Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291
| ||||| || | || ||||| ||| | |||||| | | |||||| | ||| |
Sbjct 1346381 ACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGACAAATCTGAAAATGTTCAAGACT 1346322
Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351
| | || | ||||| |||||||| || ||||| | ||||| | ||| || | ||||
Sbjct 1346321 TGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGA 1346262
Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411
|| || ||| | | ||||| || |||||| || | | | || | || |
Sbjct 1346261 CTGTCCTCATCAAGCGTAATACCACCATTCCTACCAAGCAGACACAGACTTTCACCACCT 1346202
Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471
| || || || || || ||| ||||| ||| |||||| ||| | | || |
Sbjct 1346201 ACTCTGACAACCAGCCTAGTGTGCTCATTCAGGTTTATGAAGGTGAACGTGCCGTGACCA 1346142
Query 552472 AAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT---TCCTCCTGCTCCTCGTG 552528
| ||||| || | || || | ||| | | ||| || ||||||||| || || |
Sbjct 1346141 AGGATAACAACCTGCTGGGCAAGTTTGAACTCACAGGCATACCTCCTCCTGCCCCCCGGG 1346082
Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTG 552588
| || || || |||||||| ||||| ||||| |||||||| || ||| | ||||| |||
Sbjct 1346081 GTGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAAAGGCATTCTCAATGTTTCTG 1346022
Query 552589 CTTGTGATAA 552598
|| |||||
Sbjct 1346021 CTGTGGATAA 1346012
>seq68779
Length=1714688
Score = 122 bits (134), Expect = 7e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| | || || | || ||||| || ||||| |||||||| || ||||| |||||
Sbjct 680690 GTTACCAACGCTGTTGTCACAGTACCTGCCTATTTCAATGACTCTCAGCGTCAGGCTACC 680749
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| ||||||||| || || || ||||| || |||||||| || ||||||
Sbjct 680750 AAAGATGCTGGAACTATTGCTGGTCTCAACGTACTTCGAATCATCAATGAGCCAACTGCT 680809
Query 550511 GCTGCACTTGCATATGG 550527
||||| |||| |||||
Sbjct 680810 GCTGCTATTGCCTATGG 680826
Score = 107 bits (118), Expect = 2e-17
Identities = 134/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||| | || ||||| ||| |||||| ||||| | || |||| ||||| |||
Sbjct 679856 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATGGAAAAGTGGAA 679915
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| |||||||||||||| || ||| |||| || ||| ||||| | || || || |||
Sbjct 679916 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACT 679975
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177
|||| || | |||||||| ||||| | |||| | | ||||| ||||| || ||
Sbjct 679976 GAACGATTGATCGGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACCAACACGGTT 680035
Query 550178 TTTG 550181
||||
Sbjct 680036 TTTG 680039
>seq39809
Length=6989
Score = 118 bits (130), Expect = 9e-21
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||| | || ||||| ||| |||||| ||||| | || |||| || || |||
Sbjct 210 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAA 151
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| |||||||||||||| || | | |||| || ||| ||||| | || || || |||
Sbjct 150 ATAATTGCCAATGATCAGGGGAGCCGAACCACCCCAAGCTATGTCGCCTTTACTGATACT 91
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175
|||| || | |||||||| ||||| | |||| || || ||||| ||||| ||
Sbjct 90 GAACGATTGATCGGTGATGCTGCAAAGAACCAAGTTGCAATG--AATCCCACCAACACGG 33
Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAG 550206
|||||||||| ||||| | |||||| ||||
Sbjct 32 TTTTTGATGCCAAACGACTTATTGGACGAAG 2
>seq45446
Length=1454406
Score = 96.9 bits (106), Expect = 3e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| ||||||| | ||||||||||||||||| ||||| | ||||| || || ||
Sbjct 650330 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACG 650389
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503
|||||||||||| |||||||||| | ||||| | | || |||||||| ||
Sbjct 650390 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 650442
>seq34609
Length=2775773
Score = 95.1 bits (104), Expect = 1e-13
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 563269 AGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326
|||||||| || ||| |||| ||| ||||| |||| | ||| | | |||||| |
Sbjct 2545736 AGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTTCCA 2545793
Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386
|||| || || |||| || ||||||||||| ||||||||||||||||| ||||| || |
Sbjct 2545794 GTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGA 2545853
Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTAC 563446
| || ||||| || |||||||| | | | || ||||| | || || |
Sbjct 2545854 TCTTGGCCTTTACATTTTCTATTGTATCTGAGGGCTCGACCTCAAGAGTGATGGTCTTCC 2545913
Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| || || || || | |||||| |||||
Sbjct 2545914 CTGTCAGGGTCTTCATGAAAATCTGCAT 2545941
>seq42836
Length=1893264
Score = 93.3 bits (102), Expect = 3e-13
Identities = 134/185 (72%), Gaps = 3/185 (2%)
Strand=Plus/Minus
Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351
||| ||||| |||| | ||| | | |||||| | ||| || || ||||| || |||||
Sbjct 1011567 AATGTTGTAGTCAGACAAAGTACGTCCATCTTCCACTTGCTTCCCAGCAAAGATCAGTCT 1011508
Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411
|||||| ||||||||||||||||| ||||| || || || |||| | || |||||
Sbjct 1011507 TTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCATTACATCTTCTATTGT 1011448
Query 563412 ATCAGTGTG-AGTACATTCGAGAGTAACAGTTTTACCAGT-AAGAGTTTTAACGAAAATT 563469
|| | | | || || |||||| | || || || || |||||| || || |||||
Sbjct 1011447 TTCCGAGGGCTCGACCTT-GAGAGTGATGGTCTTCCCTGTCAAGAGTCTTCACAAAAATC 1011389
Query 563470 TGCAT 563474
|||||
Sbjct 1011388 TGCAT 1011384
>seq25926
Length=4460019
Score = 87.8 bits (96), Expect = 1e-11
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351
||| ||| | |||| | ||| | | |||||| ||||| || || ||||| || |||||
Sbjct 2859514 AATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 2859573
Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411
|||||| ||||||||||||||||| ||||| || || || ||||| || ||||
Sbjct 2859574 TTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGT 2859633
Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
||| | | | || ||||| | || || | || || || || |||||||| ||
Sbjct 2859634 ATCCGAGGGCTCGACCTCAAGAGTGATGGTCTTCCTCGTCAGGGTCTTCACGAAAATCTG 2859693
Query 563472 CAT 563474
|||
Sbjct 2859694 CAT 2859696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4025206969686800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |