Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq23527 86.0 8e-12 >seq23527 Length=213645 Score = 86.0 bits (94), Expect = 8e-12 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 2259 TGCGAGATCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGG 2318 || |||||||| |||||||| ||||| ||| |||| ||||| ||| |||| |||| ||| Sbjct 133272 TGTGAGATCCAGCTGACCTGCTCTGTGGAGAATCCAAATGATAACGTCTCATTCAGGTGG 133331 Query 2319 GAGGCCTTG--GGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCA 2376 ||| ||| || || | || | || | || ||| | | ||||||||||||| Sbjct 133332 CAGG--TTGCAGGAAATCCATATCATAGTGAAACAAATCTCTCTATATCCTGGGACCCCA 133389 Query 2377 GGAACAGCAGTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTT 2436 || | |||||| ||| |||||| ||||| || || || |||| ||| | | || | Sbjct 133390 AGAGCCTCAGTGAAGAGACCTACACCTGCATAGCTGAGAATCCTGTCAGCTTTTTATCCT 133449 Query 2437 TCACGGTCTCGGCCCAGA 2454 | | ||||| | | ||| Sbjct 133450 CCTCTGTCTCTGACAAGA 133467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628674997787200