Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_016762.1
Length=49135
Score E
Sequences producing significant alignments: (Bits) Value
seq74126 127 6e-25
>seq74126
Length=69924
Score = 127 bits (140), Expect = 6e-25
Identities = 390/590 (66%), Gaps = 21/590 (4%)
Strand=Plus/Plus
Query 40368 GACCGCATCGCGGCGCAGACCGAAAGCCGCGTCTCGGTAGAGGCTACCCGCATGCTACCG 40427
||||| || ||||||| | ||||||| ||| || ||||| || || | || |||
Sbjct 31114 GACCGGCTCTCGGCGCAATCTGAAAGCCTGGTCAGTGTCGAGGCAACACGTGTACTGCCG 31173
Query 40428 ACTCGGCAGAACGGTGCATGGACGCCTGA-ACTCGCAACGCGAGACATCGTCCCGTTCCT 40486
|| | |||||| ||| | || || | | ||||| || ||||| |||| |
Sbjct 31174 GTGCGCTCGGGCGGTGCCTGGGCAGTGGAGACAC-CGACGCGGGATATCGTGCCGTGGTT 31232
Query 40487 CTGCTATATCGCCAAGGAGCGCGGCTACACCGATGCGGATCTCGACCTCGAAGAACTGGA 40546
| ||| ||||| ||| | ||||||||||||||| ||||| || || | || |||||
Sbjct 31233 CCTCTACATCGCAAAGTCGGCCGGCTACACCGATGCCGATCTGGATCTGGTCGAGCTGGA 31292
Query 40547 TAGGCTGGACGCCGTCTGGAAGGCCCGCGGCGACACGTTCGACATGATCTACGAGGACGG 40606
| || | | || | || ||||||||||| || ||||||| || ||||
Sbjct 31293 CCGACTTCATGATGTGTACCGCGCACGCGGCGACACCTTTGACATGACGATTGATGACGC 31352
Query 40607 CAAGA---TCACCGTCGCCCAGATCATGGACGACGTGCTTGCAGCCGGATATGCGGAGAA 40663
|| | ||| | ||| ||| |||||| ||| || ||||| | | ||
Sbjct 31353 CAGTACGGTCAAAGACGCG------ATGAACGACGCGCTGGCCGCCGGGTTCTCAGAACT 31406
Query 40664 GACCATCAAGCGCGGCGTGATCTCTGC-GGCCAGAGACGAGCCCAGGACAACGTTCGGGC 40722
||||||||| ||||| || | |||| || | |||||||| | || ||||| ||
Sbjct 31407 GACCATCAACCGCGGGCTGCTG-CTGCCGGTGCGCGACGAGCCGCGCACGCAGTTCGAGC 31465
Query 40723 ACATGTACTCGCCGCAGAACATG--GATGGTCCGCTGAGGATCAGCATCAGCGCTCCGTC 40780
|||||||| |||||||||||||| | | || | | | || | | | |||
Sbjct 31466 ACATGTACACGCCGCAGAACATGACCAAAGGCCTCAAACG-CCA--ACTGGTGTTCCCAT 31522
Query 40781 TGAG-GACGACTATGACGGAGTCGATGTTGAGTTCGTCAATGCCAACGGCTGGATAGAAG 40839
||| ||||| | |||||| || ||||| |||| | ||| | | | |||| | |
Sbjct 31523 CGAGCGACGATTTTGACGGTGTTGATGTCGAGTACTTCAGCTCGATCACCTGGGCATGGG 31582
Query 40840 ATACCGTCCAGTGCCGCCTGCCCGGGGATGTCGGCAGGAAGGTCGAGAAGATCACGGCTG 40899
| |||||| | |||||| ||| || || | |||| |||||||||||| ||| || ||
Sbjct 31583 AAACCGTCGAATGCCGCTGGCCGGGTGACCTTGGCAACAAGGTCGAGAAGGTCAAGG-TG 31641
Query 40900 TC-GGTGTCACAAACCGCGATCGCGCCTGGCGCTACGGAATGCGTCGCCG 40948
| || || | | ||| |||||||||||| ||| ||||| |||||
Sbjct 31642 CCGGGCATCGCCGATCGCACCCGCGCCTGGCGCATCGGCATGCGCCGCCG 31691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156966145158480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |