Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq74126 127 6e-25 >seq74126 Length=69924 Score = 127 bits (140), Expect = 6e-25 Identities = 390/590 (66%), Gaps = 21/590 (4%) Strand=Plus/Plus Query 40368 GACCGCATCGCGGCGCAGACCGAAAGCCGCGTCTCGGTAGAGGCTACCCGCATGCTACCG 40427 ||||| || ||||||| | ||||||| ||| || ||||| || || | || ||| Sbjct 31114 GACCGGCTCTCGGCGCAATCTGAAAGCCTGGTCAGTGTCGAGGCAACACGTGTACTGCCG 31173 Query 40428 ACTCGGCAGAACGGTGCATGGACGCCTGA-ACTCGCAACGCGAGACATCGTCCCGTTCCT 40486 || | |||||| ||| | || || | | ||||| || ||||| |||| | Sbjct 31174 GTGCGCTCGGGCGGTGCCTGGGCAGTGGAGACAC-CGACGCGGGATATCGTGCCGTGGTT 31232 Query 40487 CTGCTATATCGCCAAGGAGCGCGGCTACACCGATGCGGATCTCGACCTCGAAGAACTGGA 40546 | ||| ||||| ||| | ||||||||||||||| ||||| || || | || ||||| Sbjct 31233 CCTCTACATCGCAAAGTCGGCCGGCTACACCGATGCCGATCTGGATCTGGTCGAGCTGGA 31292 Query 40547 TAGGCTGGACGCCGTCTGGAAGGCCCGCGGCGACACGTTCGACATGATCTACGAGGACGG 40606 | || | | || | || ||||||||||| || ||||||| || |||| Sbjct 31293 CCGACTTCATGATGTGTACCGCGCACGCGGCGACACCTTTGACATGACGATTGATGACGC 31352 Query 40607 CAAGA---TCACCGTCGCCCAGATCATGGACGACGTGCTTGCAGCCGGATATGCGGAGAA 40663 || | ||| | ||| ||| |||||| ||| || ||||| | | || Sbjct 31353 CAGTACGGTCAAAGACGCG------ATGAACGACGCGCTGGCCGCCGGGTTCTCAGAACT 31406 Query 40664 GACCATCAAGCGCGGCGTGATCTCTGC-GGCCAGAGACGAGCCCAGGACAACGTTCGGGC 40722 ||||||||| ||||| || | |||| || | |||||||| | || ||||| || Sbjct 31407 GACCATCAACCGCGGGCTGCTG-CTGCCGGTGCGCGACGAGCCGCGCACGCAGTTCGAGC 31465 Query 40723 ACATGTACTCGCCGCAGAACATG--GATGGTCCGCTGAGGATCAGCATCAGCGCTCCGTC 40780 |||||||| |||||||||||||| | | || | | | || | | | ||| Sbjct 31466 ACATGTACACGCCGCAGAACATGACCAAAGGCCTCAAACG-CCA--ACTGGTGTTCCCAT 31522 Query 40781 TGAG-GACGACTATGACGGAGTCGATGTTGAGTTCGTCAATGCCAACGGCTGGATAGAAG 40839 ||| ||||| | |||||| || ||||| |||| | ||| | | | |||| | | Sbjct 31523 CGAGCGACGATTTTGACGGTGTTGATGTCGAGTACTTCAGCTCGATCACCTGGGCATGGG 31582 Query 40840 ATACCGTCCAGTGCCGCCTGCCCGGGGATGTCGGCAGGAAGGTCGAGAAGATCACGGCTG 40899 | |||||| | |||||| ||| || || | |||| |||||||||||| ||| || || Sbjct 31583 AAACCGTCGAATGCCGCTGGCCGGGTGACCTTGGCAACAAGGTCGAGAAGGTCAAGG-TG 31641 Query 40900 TC-GGTGTCACAAACCGCGATCGCGCCTGGCGCTACGGAATGCGTCGCCG 40948 | || || | | ||| |||||||||||| ||| ||||| ||||| Sbjct 31642 CCGGGCATCGCCGATCGCACCCGCGCCTGGCGCATCGGCATGCGCCGCCG 31691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156966145158480