Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq26065 102 1e-16 seq29163 86.0 7e-12 >seq26065 Length=1373002 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | ||||| ||||| || | ||| ||||| | |||||||| | Sbjct 1017728 CTTCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGTCCTCTTTTCT 1017669 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| | Sbjct 1017668 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1017609 Query 37318 CTAC 37321 | || Sbjct 1017608 CCAC 1017605 >seq29163 Length=2664742 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/94 (82%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| ||||||||| | ||||| || || |||| |||| || || || || ||||| || | Sbjct 303114 CATCACTCCCATTCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCCT 303056 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||| |||||||||||||| ||||||||||| Sbjct 303055 CCAGTGAAATATTTTCCATAAAGTCAAATGGATT 303022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591744325812800