Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq66703 224 7e-54 >seq66703 Length=1304 Score = 224 bits (248), Expect = 7e-54 Identities = 239/314 (76%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 45190 ATGAGTGTGCATACATGGACGTAAGCAACCTTTCGAGAACTCTCCAGGATTCCAGAAGGT 45249 |||||| |||||||| |||||||| || || | ||||| || ||||| ||||||| Sbjct 614 ATGAGTATGCATACAAGGACGTAAACATCCCATATGAAACTCACCTGGATTGTAGAAGGT 555 Query 45250 TAGAATTTCCCCACGATCATCAATGCCCTTCTTCAGGTTATGATAAATCTTGGCTAGTTG 45309 ||||||||| || || |||||||| || || || ||||| ||| ||||| || || Sbjct 554 TAGAATTTCACCTCGGTCATCAATACCGTTTCGCAAGTTATCATAGATCTTATGAAGCTG 495 Query 45310 GTCAAACATAAGACCATCGGAATTAGTCCACTGACGTCCTTGAACACCATAGACTCGTCC 45369 ||||||| || | |||||| |||| || || || |||||||| ||||| || Sbjct 494 GTCAAACTCCTCTCCTACTGAATTACGCCACCTGCGCCCCTGTACACCATAAACTCGGCC 435 Query 45370 CATATCATCCTCACCTTTGCGATATGGATTGTCTAGCCAAGCTAAGTTTTCATTTGCATT 45429 ||||||||||| |||||| ||||| ||||| ||| ||||||| |||||||| ||||| Sbjct 434 CATATCATCCTTACCTTTACGATAAGGATTAGCTAACCAAGCTTCATTTTCATTGGCATT 375 Query 45430 AGCATTCCATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAATCATACCCACGCAG 45489 ||| |||||||| ||| |||||||| || || || ||||| |||||| ||||| || Sbjct 374 AGCGTTCCATGTATTACATCCAATAGCTCGAAACTGAGCTGCGCTATCATAACCACGTAG 315 Query 45490 ATACCC-AATCATT 45502 |||||| ||| ||| Sbjct 314 ATACCCTAATAATT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347876673559280