Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_017975.1
Length=167292
Score E
Sequences producing significant alignments: (Bits) Value
seq66703 132 5e-26
>seq66703
Length=1304
Score = 132 bits (146), Expect = 5e-26
Identities = 483/743 (65%), Gaps = 69/743 (9%)
Strand=Plus/Minus
Query 96727 TTCTAGTTGGTCTTCGTAGATATGAACGTTAACTAGTTTATGACCCGCTGTCTTAGGCTT 96786
|| || ||| ||||| || ||||| | || || | |||||| ||| | | ||
Sbjct 806 TTGTAATTGATCTTCATAAATATGTGCATTTACGATCTTATGATAAGCTTTTCCGGCCTC 747
Query 96787 GTTGTTTGTAATTTGAGCCATAAGAGCAAGTAACGTAAATACTTGAACTTGATTAAATGC 96846
|| | |||||||||||||| ||||| ||||| ||||| ||||||| ||||||||
Sbjct 746 GTGGCCCGTAATTTGAGCCATGAGAGCTAGTAAGGTAAACACTTGAATCTGATTAAAATT 687
Query 96847 ACTACCTAAACAATGGT----CTGCTGAACGTTGATTACTATCT-AGGTATAACTTACCA 96901
|||||| |||| | ||||||||| | | | | | || | ||| |||
Sbjct 686 TTGACCTAA----TGGTACATCACATGAACGTTG-TGATGAAGTCAAATAAAGCTTGCCA 632
Query 96902 T-TAACTAAAGAGAAATG-ATGTTCATACATACACGGACGTAAGCAACCTAAATTAAATG 96959
|||| || || ||||| ||| || |||||| |||||||| || || | || |||
Sbjct 631 CCTAAC-AACGA-AAATGTATGAGTATGCATACAAGGACGTAAACATCCCATATGAAACT 574
Query 96960 CACCTGGATTCCACATTTGCCAGA-TCTCACCACGGTCATCAATACCATCTTTAAGATTA 97018
|||||||||| | | | ||| | ||||| |||||||||||||| | | | |||
Sbjct 573 CACCTGGATTGTAGAAG-GTTAGAATTTCACCTCGGTCATCAATACCGTTTCGCAAGTTA 515
Query 97019 TTATAAATCTTTTCTAGTTGGTCAAGACTACCAGTAATACATAACTTACCTGGGTTCTCT 97078
| ||| ||||| | || ||||||| ||| ||| |||
Sbjct 514 TCATAGATCTTATGAAGCTGGTCAA------------------ACT--CCT-----CTCC 480
Query 97079 TTAGACTCTCCAAGTATAGGCCAGTTGTTACCGACTGCACCATATACATAACCCATATCA 97138
| ||| | | || |||| || || | ||||||| || |||||||||
Sbjct 479 T---ACTG----AAT-TACGCCACCTGCGCCCCTGTACACCATAAACTCGGCCCATATCA 428
Query 97139 TCTTCGCCGCGACGAGACTCGTTAGCTAACCACGCTTCATTTAAGTTAGCATTAGCATCC 97198
|| | || |||| | ||||||||||| ||||||||| || |||||||| | |
Sbjct 427 TCCTTACCTTTACGATAAGGATTAGCTAACCAAGCTTCATTTTCATTGGCATTAGCGTTC 368
Query 97199 CAAGTTTTAGTTCC--TAACTTACGGAAGTCTTCTGCGTTAGTGTAACCACGAATGTAAC 97256
|| || ||| ||| || || || || | ||||| || |||||||| | || |
Sbjct 367 CATGTATTACATCCAATAGCT--CGAAACTGAGCTGCGCTATCATAACCACGTAGATACC 310
Query 97257 CTAGTAGTTCGGCTACGGCTGCTTTCCAATAACTCTTACGTGTAGTAAGCA--TCG-GTA 97313
||| || ||| || | |||||||||||||||||||| || ||||| | | || |||
Sbjct 309 CTAATAATTCTGCGATAGCTGCTTTCCAATAACTCTTTCGAGTAGTTACTAAGNCGAGTA 250
Query 97314 GT---------ATAC----CTGCTTCAACATCATATTCCATGTTAGCACGTATAACAGTT 97360
|| | || || | || | ||||| | | |||| ||||| |||
Sbjct 249 GTCACTAAAGGAAACTCATTAGCGCCTACGTTGTATTCTAAATCAGCATTAATAACGGTT 190
Query 97361 AGGCAACGTTTACCTGTACGTTCATTATATACCCATTCACCTTCTTCTACAATACGACGA 97420
| |||||| || || || |||||||| | |||||| |||| || || || ||||| ||
Sbjct 189 AAGCAACGCTTTCCAGTCCGTTCATTCTCGACCCATACACCCTCATCAACTATACGTTGA 130
Query 97421 CCTAAGTCTAAATAAGATTTCAT 97443
| ||| |||| ||| ||||||
Sbjct 129 CATAAATCTAGATACTGTTTCAT 107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534689123014400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |