Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_018283.1
Length=58065
Score E
Sequences producing significant alignments: (Bits) Value
seq15370 109 2e-19
>seq15370
Length=122281
Score = 109 bits (120), Expect = 2e-19
Identities = 268/400 (67%), Gaps = 15/400 (4%)
Strand=Plus/Minus
Query 42270 TCGTAGGTGGACAGGCCGGCCTTGATGCGCAGGATGGCGGCTTGCGTCTCCTTCAGTTCG 42329
|||||||| || || | ||||||| |||| | || | || || ||||| || |
Sbjct 15734 TCGTAGGTCGAGAGTTTGTGCTTGATGAGCAGAACGGACGACTGAGTTTCCTTGAGAGGG 15675
Query 42330 TCGATCTGACCACGGCTTGCGCCGATCCACGAGCACGCGCAGTAGGCTTCCTTCATCAGC 42389
|| |||||||| ||| |||||||||||| ||| || | ||||||| || |||
Sbjct 15674 TCAATCTGACCGCGGGCTGCGCCGATCCATTCGCAAGCCGTGATGGCTTCCATCGCAAGC 15615
Query 42390 GGCTCGTAGAAG---TGCGC-GGCGG---TCTTGCCCTTCGGCAGCGGCACGTTGCCGGC 42442
|| |||| ||| |||| | ||| | | | |||||| | | | | || || |
Sbjct 15614 GGTGCGTA-AAGCCAAGCGCTGTCGGACCCCATCCGCTTCGGTAAGGACTTGATGACGCC 15556
Query 42443 ---GTTGATCTCTTCTTCGAGCACCAGCATGTAGATGCCCGTCGCAAAGCGGTCGGCCAC 42499
||||||| ||||||||||| ||| ||||||| | || || |||||||| ||
Sbjct 15555 TTTGTTGATCGCTTCTTCGAGCCACAGGCGGTAGATGATGTTGGCGAACCGGTCGGCGAC 15496
Query 42500 GGTCTTCTTGCG--CGACTGCATGAAGCGCCACGTTGCGCCCATGCTGGCGCGAACCGAC 42557
||||||||| |||| ||| || ||| ||| || ||| |||||| |||||
Sbjct 15495 CACCTTCTTGCGGCCGAC--CATAAATTTCCAAGTTTCGGTCATCGCGGCGCGGGCCGAC 15438
Query 42558 GCGTAGCTCGTCTTCGAGTAGTCCCGCGAGTATTCCTCGTAGGACAGGCCGAGGCCCGCC 42617
| |||| |||||| | |||||| || | ||||||||| | ||| || ||
Sbjct 15437 GAGTAGTTCGTCTCGGTATAGTCCTTGGAAAGCTGCTCGTAGGATACGCCAAGCAAGGCT 15378
Query 42618 GCGATGTGACGATGCAGCGATTCCTCGAACCCCGTGCCGA 42657
||||||| || | | || | ||||||| || ||||||
Sbjct 15377 GCGATGTTGCGCAGAATGGACTGCTCGAACTCCATGCCGA 15338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 185515907389680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |