Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_018283.1 Length=58065 Score E Sequences producing significant alignments: (Bits) Value seq15370 109 2e-19 >seq15370 Length=122281 Score = 109 bits (120), Expect = 2e-19 Identities = 268/400 (67%), Gaps = 15/400 (4%) Strand=Plus/Minus Query 42270 TCGTAGGTGGACAGGCCGGCCTTGATGCGCAGGATGGCGGCTTGCGTCTCCTTCAGTTCG 42329 |||||||| || || | ||||||| |||| | || | || || ||||| || | Sbjct 15734 TCGTAGGTCGAGAGTTTGTGCTTGATGAGCAGAACGGACGACTGAGTTTCCTTGAGAGGG 15675 Query 42330 TCGATCTGACCACGGCTTGCGCCGATCCACGAGCACGCGCAGTAGGCTTCCTTCATCAGC 42389 || |||||||| ||| |||||||||||| ||| || | ||||||| || ||| Sbjct 15674 TCAATCTGACCGCGGGCTGCGCCGATCCATTCGCAAGCCGTGATGGCTTCCATCGCAAGC 15615 Query 42390 GGCTCGTAGAAG---TGCGC-GGCGG---TCTTGCCCTTCGGCAGCGGCACGTTGCCGGC 42442 || |||| ||| |||| | ||| | | | |||||| | | | | || || | Sbjct 15614 GGTGCGTA-AAGCCAAGCGCTGTCGGACCCCATCCGCTTCGGTAAGGACTTGATGACGCC 15556 Query 42443 ---GTTGATCTCTTCTTCGAGCACCAGCATGTAGATGCCCGTCGCAAAGCGGTCGGCCAC 42499 ||||||| ||||||||||| ||| ||||||| | || || |||||||| || Sbjct 15555 TTTGTTGATCGCTTCTTCGAGCCACAGGCGGTAGATGATGTTGGCGAACCGGTCGGCGAC 15496 Query 42500 GGTCTTCTTGCG--CGACTGCATGAAGCGCCACGTTGCGCCCATGCTGGCGCGAACCGAC 42557 ||||||||| |||| ||| || ||| ||| || ||| |||||| ||||| Sbjct 15495 CACCTTCTTGCGGCCGAC--CATAAATTTCCAAGTTTCGGTCATCGCGGCGCGGGCCGAC 15438 Query 42558 GCGTAGCTCGTCTTCGAGTAGTCCCGCGAGTATTCCTCGTAGGACAGGCCGAGGCCCGCC 42617 | |||| |||||| | |||||| || | ||||||||| | ||| || || Sbjct 15437 GAGTAGTTCGTCTCGGTATAGTCCTTGGAAAGCTGCTCGTAGGATACGCCAAGCAAGGCT 15378 Query 42618 GCGATGTGACGATGCAGCGATTCCTCGAACCCCGTGCCGA 42657 ||||||| || | | || | ||||||| || |||||| Sbjct 15377 GCGATGTTGCGCAGAATGGACTGCTCGAACTCCATGCCGA 15338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185515907389680