Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq75383 102 6e-17
seq42836 102 6e-17
seq33366 100 2e-16
>seq75383
Length=1910755
Score = 102 bits (112), Expect = 6e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || ||||| || || ||||| || | | || | |||| |||| ||
Sbjct 168980 TGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGT 168921
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| ||||| | ||| || || || || ||||||||||| ||||| || ||
Sbjct 168920 TTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCTTGTATCTTC 168861
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||| || ||||| || ||||||| ||||| || ||
Sbjct 168860 ACCTTGACATTCTCGATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGTTTTACCAGTG 168801
Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472
| || |||||||| |||||||| ||
Sbjct 168800 AGGGTCTTTACAAAGATCTGCATTGT 168775
>seq42836
Length=1893264
Score = 102 bits (112), Expect = 6e-17
Identities = 151/213 (71%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| ||||||||||| || || || ||||| || ||||| || | | ||| | ||||
Sbjct 1011596 AACACTAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 1011537
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||| || ||||| |||| | || || || || ||||| ||||| |||||
Sbjct 1011536 TCCACTTGCTTCCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCC 1011477
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || ||||| ||||| || || || | || || | ||||||| ||
Sbjct 1011476 TGGATCTTGACCATTACATCTTCTATTGTTTCCGAGGGCTCGACCTTGAGAGTGATGGTC 1011417
Query 101438 TTGCCGGTTAA-AGTTTTTACAAATATCTGCAT 101469
|| || || || ||| || ||||| ||||||||
Sbjct 1011416 TTCCCTGTCAAGAGTCTTCACAAAAATCTGCAT 1011384
>seq33366
Length=1752596
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || |||||||| | | ||| | | |||| |||| |||
Sbjct 780150 TGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGC 780091
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | | ||| || || || ||||||||||| ||||| || || ||
Sbjct 780090 TTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGGATCTTG 780031
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||| | ||||| || || |||| || ||||||||
Sbjct 780030 GCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTC 779971
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || || |||||
Sbjct 779970 AGGGTTTTCACGAAGATTTGCAT 779948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395904972003240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |