Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_018832.1 Length=58104 Score E Sequences producing significant alignments: (Bits) Value seq15370 87.8 7e-13 >seq15370 Length=122281 Score = 87.8 bits (96), Expect = 7e-13 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45135 GGCACGGATTACGAAGAGTCGTTGCTGCGGAACATCGCCGCCACTCTCGGCCTCTCGTAC 45194 |||| ||| | ||| |||| | ||||| |||||||| ||| || ||| | || ||| Sbjct 15340 GGCATGGAGTTCGAGCAGTCCATTCTGCGCAACATCGCAGCCTTGCTTGGCGTATCCTAC 15399 Query 45195 GAGCAGTTTAGCCGCGATTACACAAAGACGAACTACAGCTCGGCGCGTGCATCGATGGCA 45254 |||||| || | || || || ||||||||||| ||||| || || ||||| | Sbjct 15400 GAGCAGCTTTCCAAGGACTATACCGAGACGAACTACTCGTCGGCCCGCGCCGCGATGACC 15459 Query 45255 GAAACGTGGAAATACATGGGCAGCCGTAAAAAATTAGTTGCTGATAAATTTGCGTCCATG 45314 ||||| ||||||| |||| | |||| || || | || || || || || ||| Sbjct 15460 GAAACTTGGAAATTTATGGTCGGCCGCAAGAAGGTGGTCGCCGACCGGTTCGCCAACATC 15519 Query 45315 ATTTACACTCTTTGGCTAGAAGAAGAGGTGAAC 45347 || ||| || ||||| ||||||| | | ||| Sbjct 15520 ATCTACCGCCTGTGGCTCGAAGAAGCGATCAAC 15552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185640592801440