Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq33366 91.5 1e-13
seq42836 87.8 1e-12
>seq33366
Length=1752596
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| ||||| || || | |||| || || || |||||| ||||| |||||||||||
Sbjct 780175 GCCACCCCTAAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGA 780116
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
||| | || | || |||| |||||| |||||||| || || | ||| || || | |||
Sbjct 780115 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 780056
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
|| ||| ||||| || ||||| || ||| | | | || | ||||||
Sbjct 780055 AATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCAC 779996
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || || || || |||| ||||| || || || |||||
Sbjct 779995 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATTTGCAT 779948
>seq42836
Length=1893264
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/218 (69%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| ||||| || ||| ||| |||||||| ||||| ||||| | | | || | ||
Sbjct 1011597 CAACACTAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 1011538
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| ||||||| || || || | |||| || ||||| ||
Sbjct 1011537 TTCCACTTGCTTCCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATC 1011478
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| ||||| | | | || || | ||| |||| | || || ||
Sbjct 1011477 CTGGATCTTGACCATTACATCTTCTATTGTTTCCGAGGGCTCGACCTTGAGAGTGATGGT 1011418
Query 48734 TTTTCCCGTCAA-AGTTTTTACAAAAATCTGCATCGTG 48770
|| || ||||| ||| || ||||||||||||||| ||
Sbjct 1011417 CTTCCCTGTCAAGAGTCTTCACAAAAATCTGCATCTTG 1011380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380578628214360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |