Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq56562 178 2e-39
seq29245 136 7e-27
seq26066 98.7 2e-15
seq36501 95.1 2e-14
>seq56562
Length=1778904
Score = 178 bits (196), Expect = 2e-39
Identities = 185/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444
||| | || ||||| | || | ||| || ||||| ||||||||| |||||||||||
Sbjct 653216 AGCAGTTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGC 653275
Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504
||||| || | | || || |||||||| || ||||| || | |||||| ||||||
Sbjct 653276 TCCCGGAGGAGGCCGGCAGTGTTGGACAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCACC 653335
Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564
|| |||||||| ||||||||||| ||||| || ||| ||||| |||||||| ||||
Sbjct 653336 TTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGC 653395
Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624
||||| || || | ||| || || | |||||||| |||||||| ||||||| ||| ||
Sbjct 653396 CGGTTTCGCAGCCGCTTGCGCTCTACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGG 653455
Query 241625 GAC 241627
|||
Sbjct 653456 GAC 653458
Score = 89.7 bits (98), Expect = 1e-12
Identities = 88/115 (77%), Gaps = 8/115 (7%)
Strand=Plus/Plus
Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985
|||||||||| ||||||||| | ||||| || | | || || |||||||| |||||||
Sbjct 653253 TCTGTTTGAGCTGGGCCACCTGCTCCCGGAGGAGGCCGGCAGTGTTGGACAGCCCCGCGT 653312
Query 238986 TATCAGACTTGAG--------CATTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032
| || | |||||| | || |||||||| ||||||||||| ||||||||
Sbjct 653313 TCTCGGCCTTGAGTGTCTTCACCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTT 653367
>seq29245
Length=1237374
Score = 136 bits (150), Expect = 7e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| || |||||||| || ||||| | | ||| || | |||
Sbjct 1137330 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCCGTGGACGCCAGC 1137271
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | ||||||| ||||||||||||||| || |||| |||||| |||||
Sbjct 1137270 TCCGTGTTCTGGCTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 1137211
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|||||| |||||| |||| ||| || | |||||| || || | ||| || || |||||
Sbjct 1137210 TTGCGCTTGCGGCACTTGGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCTGCCTTA 1137151
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| || || ||||||||||| || |||
Sbjct 1137150 ATGCGCTCTTGCGTGTCCATGTCGATGGGCGAC 1137118
>seq26066
Length=2031986
Score = 98.7 bits (108), Expect = 2e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||||||||||||||| | ||||| || | ||||| |||| |||
Sbjct 1123866 TTCACTTTTTCCTCCAGCCGCGCGATCCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 1123807
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | |||||||| | | ||| | ||||||||||| || |||||| ||||||||||
Sbjct 1123806 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 1123747
Query 241619 ATCGGAGAC 241627
|| || |||
Sbjct 1123746 ATGGGGGAC 1123738
>seq36501
Length=2370580
Score = 95.1 bits (104), Expect = 2e-14
Identities = 97/124 (78%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|| ||||||| || || |||||||||||||||||| |||||| |||| |||||| |||
Sbjct 2283011 GTATACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAAGTTCTGCTGG 2282952
Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646
||| || || | || ||||| |||||||||||||| |||| || |||||| |||
Sbjct 2282951 -TTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 2282893
Query 213647 GGAC 213650
|||
Sbjct 2282892 AGAC 2282889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930632473548800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |