Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq29163 100 5e-16
seq26065 93.3 8e-14
>seq29163
Length=2664742
Score = 100 bits (110), Expect = 5e-16
Identities = 100/127 (79%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||||||||||||||| ||||| |||||||| || |||||| |||||| | || ||||
Sbjct 301392 TGGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCGTCTATATTCT 301451
Query 25943 GGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001
|||||||| | | | |||| ||||| || || |||||||| || || || |||||
Sbjct 301452 GGCTCAAG-AAACGAGGACTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGA 301510
Query 26002 GACGAGG 26008
|||||||
Sbjct 301511 GACGAGG 301517
>seq26065
Length=1373002
Score = 93.3 bits (102), Expect = 8e-14
Identities = 99/128 (77%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939
|| |||| |||||||||||||| || || || || ||| || || ||||| || || |
Sbjct 1017600 GGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATAT 1017659
Query 25940 TCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
||||||| ||| | ||| |||| |||||| || || |||||||| ||||||||||||
Sbjct 1017660 TCTGGCTAAAG-AAAAGAGGACTCATGCCTGGACTCACTTTTTCCAATGAGCTCATCAGC 1017718
Query 25999 AGGGACGA 26006
|| || ||
Sbjct 1017719 AGAGATGA 1017726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 927947071500800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |