Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq4033 96.9 5e-15 >seq4033 Length=1341 Score = 96.9 bits (106), Expect = 5e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 139823 ACGATATTTGCATATCGTGTAAATGATCCTCAGAGATATGGTGTAGTTGAATTCGATGAA 139882 ||| |||||| |||| || || || || || | | |||||| ||||||||||| || Sbjct 709 ACGGTATTTGGTTATCAAGTGAAAGACCCAGAGCGTTTTGGTGTTGTTGAATTCGACAAA 768 Query 139883 TATGATAACGCTGTTTCGATCGAAGAAAAACCTTTGAATCCTAAATCTAATTACGCAGTA 139942 | || || |||| |||||||| ||||| || || || |||||||| ||||| Sbjct 769 GACATGAAAGCAATTTCAATCGAAGAGAAACCAGAAAAACCAAAGTCTAATTATGCAGTT 828 Query 139943 CCAGGCTTATATTTCTATAATAACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTCA 140002 |||| |||||||| ||| |||| ||| ||||| |||| || | ||||| ||| Sbjct 829 ACAGGGTTATATTTTTATGATAATCGTGTAGTCGAATTAGCGAAACAGGTAAAACCATCA 888 Query 140003 GCTCGTGGAGA 140013 ||||||||| Sbjct 889 CATCGTGGAGA 899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701184049990400