Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_019522.1
Length=48454
Score E
Sequences producing significant alignments: (Bits) Value
seq74011 107 6e-19
>seq74011
Length=426741
Score = 107 bits (118), Expect = 6e-19
Identities = 238/348 (68%), Gaps = 13/348 (4%)
Strand=Plus/Minus
Query 11991 GTGCTGTGGCAGCCGTATGTTCTGGCGTGACAAACGCGATCCGCGCGCGGTGTTTATGGA 12050
||||||||||||||| ||||| ||| ||||| |||| | |||||| | || ||
Sbjct 239393 GTGCTGTGGCAGCCGAATGTTTTGGTTCGACAAGAGCGACCAGCGCGCCCTCTTCGGCGA 239334
Query 12051 TAACCGCAGCGAACAGCACACACTGTGCGACGGCCGCAGCCTGGTTA---TCTCTCCTGA 12107
|| |||| ||| |||||| ||||| || |||| || || | | | || |
Sbjct 239333 TATCCGCGACGAGCAGCACGTTCTGTGTGATGGCC---GCGTGTTAAAGGTTGAGCCCAA 239277
Query 12108 CATCATCGCTGACTTTCGCCAGCTCCCTTTTGCTGATGAGTCGTTTCCTGTTGTCGTATT 12167
| ||||| ||||||||| || || || ||||||| | ||| | || || ||
Sbjct 239276 CGTCATCATGGACTTTCGCACCCTACCCTTCGCTGATGGTGCATTTAAGTTGGTGGTGTT 239217
Query 12168 CGACCCTCCACATCTTGAAAGAGCAGGGCCAGAGGGCTGGATGCGCAAAAAATACGGCGT 12227
|| || || ||||| || || || | || ||||| |||| || |||||| |
Sbjct 239216 TGATCCACCGCATCTGACCAGGGCTGGCCGTGATAGCTGGCTGCGAGCCAAGTACGGCCT 239157
Query 12228 GTTGAATCCAAAGACATGGCGAGATGATTTGCGTGCTGGATTTGTCGAAGCG-TTCCGCG 12286
| | | || | ||| ||||| ||||| ||| || |||| || || | || ||||
Sbjct 239156 GCT--AACCGATGAC-TGGCGTGATGACTTGGCCAAAGGCTTTG-CGGAGTGCTTTCGCG 239101
Query 12287 TGCT-GCGACCTGATGGCGTGTTGATTTTCAAATGGAACGAAACACAG 12333
|| | || ||| |||||||||||||| ||||| |||||||||||||||
Sbjct 239100 TGTTGGCCACC-GATGGCGTGTTGATCTTCAAGTGGAACGAAACACAG 239054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154788946045440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |