Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq74011 107 6e-19 >seq74011 Length=426741 Score = 107 bits (118), Expect = 6e-19 Identities = 238/348 (68%), Gaps = 13/348 (4%) Strand=Plus/Minus Query 11991 GTGCTGTGGCAGCCGTATGTTCTGGCGTGACAAACGCGATCCGCGCGCGGTGTTTATGGA 12050 ||||||||||||||| ||||| ||| ||||| |||| | |||||| | || || Sbjct 239393 GTGCTGTGGCAGCCGAATGTTTTGGTTCGACAAGAGCGACCAGCGCGCCCTCTTCGGCGA 239334 Query 12051 TAACCGCAGCGAACAGCACACACTGTGCGACGGCCGCAGCCTGGTTA---TCTCTCCTGA 12107 || |||| ||| |||||| ||||| || |||| || || | | | || | Sbjct 239333 TATCCGCGACGAGCAGCACGTTCTGTGTGATGGCC---GCGTGTTAAAGGTTGAGCCCAA 239277 Query 12108 CATCATCGCTGACTTTCGCCAGCTCCCTTTTGCTGATGAGTCGTTTCCTGTTGTCGTATT 12167 | ||||| ||||||||| || || || ||||||| | ||| | || || || Sbjct 239276 CGTCATCATGGACTTTCGCACCCTACCCTTCGCTGATGGTGCATTTAAGTTGGTGGTGTT 239217 Query 12168 CGACCCTCCACATCTTGAAAGAGCAGGGCCAGAGGGCTGGATGCGCAAAAAATACGGCGT 12227 || || || ||||| || || || | || ||||| |||| || |||||| | Sbjct 239216 TGATCCACCGCATCTGACCAGGGCTGGCCGTGATAGCTGGCTGCGAGCCAAGTACGGCCT 239157 Query 12228 GTTGAATCCAAAGACATGGCGAGATGATTTGCGTGCTGGATTTGTCGAAGCG-TTCCGCG 12286 | | | || | ||| ||||| ||||| ||| || |||| || || | || |||| Sbjct 239156 GCT--AACCGATGAC-TGGCGTGATGACTTGGCCAAAGGCTTTG-CGGAGTGCTTTCGCG 239101 Query 12287 TGCT-GCGACCTGATGGCGTGTTGATTTTCAAATGGAACGAAACACAG 12333 || | || ||| |||||||||||||| ||||| ||||||||||||||| Sbjct 239100 TGTTGGCCACC-GATGGCGTGTTGATCTTCAAGTGGAACGAAACACAG 239054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154788946045440