Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_019927.1
Length=47611
Score E
Sequences producing significant alignments: (Bits) Value
seq52475 114 4e-21
>seq52475
Length=1114
Score = 114 bits (126), Expect = 4e-21
Identities = 184/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 29559 AAGGCCCGAATGGAACAGCAGATGAATGAGTGGTTCGGGCACAA-GCCGGACTTCATCAT 29617
||||||||| ||| ||||||| || |||||| | ||| |||||| ||||||||
Sbjct 556 AAGGCCCGAGCCGAAGAGCAGATCGTTGGATGGTTCAG-CACTGTGCCGGATTTCATCAT 498
Query 29618 CACGCTGGCTGCTGACTATTGCCTGCAATGCTCCGATTTAGACTTCTGCGCACTGGTAGA 29677
||| | | |||||| ||| || | || || ||| || |||||||| ||| | ||
Sbjct 497 TACGATTGATGCTGAGTATGCGGTGGAGTGTTCAGATGCTGAGTTCTGCGCGCTGATTGA 438
Query 29678 GCATGAGCTTTATCACATCGCCCAAGAAGTGGATGAGTTTGGCTCACCGAAGTTTTACCG 29737
||||||||||||||| || ||||| |||| || || |||| ||| || | |
Sbjct 437 GCATGAGCTTTATCATGCTGCACAAGAGCGCGATGCATTCGGTGCACCAAAG-TTCAGCA 379
Query 29738 CGA-CTCAGGTAAGCCGAAGCTTTGCATGCGCGGACATGATGTTGAGGAATTCGTTGGCG 29796
|| | |||| ||| | |||||| | || ||||| || || || ||||||||||
Sbjct 378 AGAGCACAGGCCGGCCAGTATTCTGCATGAGGGGGCATGACGTGGAAGAGTTCGTTGGCG 319
Query 29797 TTGTCCGTCGATATGGCGC 29815
|||| ||||||||||| ||
Sbjct 318 TTGTTCGTCGATATGGGGC 300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152093822914320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |