Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq70604 190 1e-42 seq74433 183 2e-40 seq13228 183 2e-40 seq76194 154 1e-31 seq39809 109 4e-18 seq68779 98.7 6e-15 seq45446 87.8 1e-11 seq34609 87.8 1e-11 seq25926 87.8 1e-11 >seq70604 Length=2882449 Score = 190 bits (210), Expect = 1e-42 Identities = 372/540 (69%), Gaps = 10/540 (2%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || || |||||| | ||| | || || | || Sbjct 2374718 TGCAGTTGGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATAGAAA 2374777 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 2374778 GGTGGAAATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTAC 2374837 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| |||||| | || | |||||||| || | |||| ||| ||||| || Sbjct 2374838 TGATACTGAATGATTGATCAGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACCAA 2374897 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| || | ||||| | | ||||||||| | ||||||||| Sbjct 2374898 CACGGTTTTTGATGCCAAACGACTTATTGGATGAAGATTTGATGATGCTGTTGTCCAATC 2374957 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | |||| | |||| || ||| | || | | ||| Sbjct 2374958 TGATATGAAACATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCAAGT 2375017 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTTTT 474684 |||||| | || || || ||| | |||| | || || | | || || ||||| | Sbjct 2375018 AGAATACAAG--GGAGAGAC-AAAGAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCCT 2375074 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTA 474742 | || ||||| ||| ||| ||| | || ||||| |||| || || | || || Sbjct 2375075 GACAAAGATGAAGGAAATCGCAGAG-GCCTACCTTGG-GAAGACTGTTACCAACGCTGTT 2375132 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 | || || || || ||||| ||||| ||||| ||||| || | |||||||| |||| Sbjct 2375133 GTCACAGTACCTGCCTATTTCAATGACTCTCAGCGTCAGGCTGCCAAAGATGCTGGAACT 2375192 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||| || || | || || || ||||| ||||| || || || |||| ||| Sbjct 2375193 ATTGCTGGTCTCAACGTACTTCGAATCATCAATGAGCCAACTGCTGCTGCTATTGCCTAT 2375252 Score = 152 bits (168), Expect = 3e-31 Identities = 513/787 (65%), Gaps = 10/787 (1%) Strand=Plus/Plus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 || ||| | ||||||||||| | ||||||||| |||| ||||| || || | | | Sbjct 2375478 CGCCTTCGTACTGCTTGTGAGCATGCTAAGCGCACTCTCTCTTCCAGCACCCAGGCCAGT 2375537 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| ||||||| || | ||||||||| || | |||| |||| | | || Sbjct 2375538 ATTGAGATTGATTCCCTCTATGAAGGAATCGACTTCTATACCTCTATTCCCCGTGCCTGG 2375597 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 |||||||| | | |||| | || | || | || || || || ||| || Sbjct 2375598 TTTGAAGAATTGAATGCTGACTTGTTCCGTGGCACCCTGGACCCTGTGGAGAAAGCCCTT 2375657 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| | ||||| ||||| || || | ||||| ||||| | || || || ||||| Sbjct 2375658 CGGGATGCCAAACTGGACAAGTCTCAGATTCATGATATTGTCTTGGTTGGTGGCTCAACC 2375717 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCA-TATTTTAATGGTAAAAAGTTAAATGA 475785 | || || || || ||||| | || | | || ||||| || | | ||| | Sbjct 2375718 CGCATCCCCAAGAT-TCAGAAACTTCTCCAGGACTTCTTCAATGGGAAGGAACTGAATAA 2375776 Query 475786 AAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC 475845 || | || |||||||| ||||||||| | || || |||||||| ||||| ||||| || Sbjct 2375777 GAGCATCAACCCTGATGAGGCTGTTGCACACGGTGCAGCTGTCCAGGCAGCCATTTTGTC 2375836 Query 475846 AGGTCAATCAGACGAGAAACTAAATAATA-TTG-TACTTGTTGACGTAACTCCACTTTCA 475903 || | || | |||| | || | ||| | || | || || ||||| ||||| Sbjct 2375837 TGG--AGACAAATCTGAAAATGTTCAAGACTTGCTGCTGTTGGATGTCACTCCTCTTTCC 2375894 Query 475904 TTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATC 475963 | || ||||||| | ||| || | ||| || || || | | || || | || Sbjct 2375895 CTTGGAATTGAAACTGCTGGTGGAGTCATGGCTGTCCTCATCAAGTGTAACACCACCATT 2375954 Query 475964 CCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 || ||| | || | || |||| || |||| || || | ||| ||| Sbjct 2375955 CCTACCAAGCAGACACAGACTTTCACCACCTACCCTGACAACCAGCCTGGTGTGCTCATT 2376014 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 || | | |||||||||| | | || || ||||| ||| || || | ||| | Sbjct 2376015 CAGGTTTATGAAGGTGAACGTGCCATGACCAAGGATAACAACCTGCTGGGCAAGTTTGAA 2376074 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 || ||| || |||||||| ||| | || |||||||| |||||||| |||||| ||||| Sbjct 2376075 CTCACAGGCATACCTCCTGCCCCCCGGGGTGTTCCTCAGATTGAAGTCACTTTTCATATT 2376134 Query 476144 GATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA-ATC-TAGTAACAAGAGTAAAA 476201 ||||| ||||| ||||| |||||| ||||| ||||| | | || || ||||| || | Sbjct 2376135 GATGCCAATGGCATTCTCAATGTTTCTGCTGTGGATAAGAGCACAGGAA-AAGAG-AACA 2376192 Query 476202 ATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTG 476261 | || || || || || || || | || | | ||| | ||| |||| |||||| Sbjct 2376193 AGATTACCATCACTAATGATAAGGGCCGCTTGAGCAAGGAAGATATTGAACGCATGGTTC 2376252 Query 476262 ATGAAGC 476268 | ||||| Sbjct 2376253 AAGAAGC 2376259 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||| | |||||||| || || | ||| || |||||||||||||||||||| Sbjct 1789424 ATCTTCCAGTTGCCTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 1789483 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTAA 480735 || || ||||| || ||| ||| || ||||| | | | || | ||||| || | Sbjct 1789484 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTGGA-CCTCAAGAGTGA 1789542 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||| |||||||| || Sbjct 1789543 TGGTCTTCCCCGTTAGGGTCTTCACGAAAATCTG 1789576 >seq74433 Length=1485305 Score = 183 bits (202), Expect = 2e-40 Identities = 406/598 (68%), Gaps = 12/598 (2%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | | || || | |||||| | ||| | || |||| || Sbjct 1446759 TGCAGTTGGCATTGATCTTGTCACCACCTTTTCTTGTGTGGGTGTCTTCCAGCATGGAAA 1446818 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 1446819 GGTGGAAATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTAC 1446878 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||| ||| | || | |||||||| || | |||| ||| ||| | || Sbjct 1446879 TGATACTTAACGATTGATCGATGATGCTGCAAAGAACCAAGTCGCAATGAATTCCACCAA 1446938 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| || | ||||| | | ||||||||| | ||||||||| Sbjct 1446939 CACGGTTTTTGATGCCAAACGACTTATTGGACAAAGATTTGATGATGCTGTTGTCCAATC 1446998 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA---TATAGA 474624 ||||||| |||||||| || | |||| | |||| || ||| | || | | || Sbjct 1446999 TGATATGAAACATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCGAGT 1447058 Query 474625 AGCAATACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTTT 474683 || |||||| | || || || ||| | |||| | || || | | || || ||||| Sbjct 1447059 AG-AATACAAG--GGAGAGAC-AAAGAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCC 1447114 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGT 474741 | | || ||||| ||| ||| ||| | || ||||| |||| || || |||| || Sbjct 1447115 TGACAAAGATGAAGGAAATCGCAGAG-GCCTACCTTGG-GAAGACTGTTACCAATGCTGT 1447172 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 || || || || ||||||||||| ||||| ||||| || || |||||||| |||| Sbjct 1447173 TGCCACAGTACCTGCCTATTTTAATGACTCTCAGCGTCAGGCTACCAAAGATGCTGGAAC 1447232 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 || | ||||| || | | | || || ||||| ||||| || || || |||| || Sbjct 1447233 TATCACTGGTCTCAACATACTTCAAATCATCAATGAGCCAACTGCTGCTGCTATTGCCTA 1447292 Query 474862 TGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 ||| | || || || || |||| |||||| | |||||||||| || ||| Sbjct 1447293 TGGCTTAGACAAAAAGGTTGGAGCAGAAAGAAATGTGCTGATCTTTGATTTAGGTGGT 1447350 Score = 138 bits (152), Expect = 7e-27 Identities = 446/686 (65%), Gaps = 6/686 (1%) Strand=Plus/Plus Query 475499 GCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGAT 475558 |||||||| |||||||||| |||| ||||| || || | | | |||| ||||| Sbjct 1447540 GCTTGTGAGCGTGCTAAGCACACTCTCTCTTCCAGCACCCAGGCCAGTATTGAGATTGAT 1447599 Query 475559 TCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATT 475618 || | | ||||||||| || | |||| |||||| | || |||||||| | Sbjct 1447600 TCCTTCTATGAAGGAATCGACTTCTATACCTGTATTACCCGTGCCCGGTTTGAAGAATTG 1447659 Query 475619 TGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAA 475678 | |||| | || | || | || || || || ||| | | ||| | ||| Sbjct 1447660 AATGCTGACTTGTTCTGTGGCACCTTGGACCCTGTGGAGAAAGCCTTTCGGGATGCCAAA 1447719 Query 475679 CTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAA 475738 || ||||| || || | ||||| |||||| | || || || |||| | || || || Sbjct 1447720 CTGGACAAGTCTCAGATTCATGATATTGTTTTGGTTGGTGGCTCAATCCGCATCCCCAAG 1447779 Query 475739 ATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCC 475797 || ||||| | || | | || ||||| || | | ||| | || | || || Sbjct 1447780 ATTC-AGAAACTTCTCCAGGACTTCTTCAATGGGAAGGAACTGAATAAGAGCATCAACCC 1447838 Query 475798 TGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGA 475857 |||||| ||||||||| | || || |||||||| ||||| ||||| || || | || | Sbjct 1447839 TGATGAGGCTGTTGCACACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGA--CAAA 1447896 Query 475858 CGAGAAACTAAATAATA-TTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAA 475915 |||| | || | ||| ||||| | || ||||| ||||| | || ||||| Sbjct 1447897 TCTGAAAATGTTCAAGACTTGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAA 1447956 Query 475916 ACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAA 475975 || | ||| || | |||||| || || | | ||||| | || || ||| | Sbjct 1447957 ACTGCTGGTGGAGTCATGACTGTCCTCATCAAGCGTAATACCACCATTCCTACCAAGCAG 1448016 Query 475976 TCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAA 476035 || | || || | || |||| || || | ||| ||| || | | |||| Sbjct 1448017 ACACAGACTTTCACCGCCTACCCTGACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAA 1448076 Query 476036 GGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATT 476095 |||||| | || || ||||| |||| || || | ||| || || || Sbjct 1448077 GGTGAACATGCCATGACCAAGGATAACAACATGCTGGGCAAGTTTGGACTCACAGCCATA 1448136 Query 476096 CCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGT 476155 |||||||| ||| | || |||||||| |||||||| ||||||||||||||||| ||||| Sbjct 1448137 CCTCCTGCCCCCCGGGGTGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAATGGC 1448196 Query 476156 ATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| |||||| ||||| ||||| Sbjct 1448197 ATTCTCAATGTTTCTGCTGTGGATAA 1448222 >seq13228 Length=1472 Score = 183 bits (202), Expect = 2e-40 Identities = 406/598 (68%), Gaps = 12/598 (2%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | | || || | |||||| | ||| | || |||| || Sbjct 1035 TGCAGTTGGCATTGATCTTGTCACCACCTTTTCTTGTGTGGGTGTCTTCCAGCATGGAAA 976 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 975 GGTGGAAATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTAC 916 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||| ||| | || | |||||||| || | |||| ||| ||| | || Sbjct 915 TGATACTTAACGATTGATCGATGATGCTGCAAAGAACCAAGTCGCAATGAATTCCACCAA 856 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| || | ||||| | | ||||||||| | ||||||||| Sbjct 855 CACGGTTTTTGATGCCAAACGACTTATTGGACAAAGATTTGATGATGCTGTTGTCCAATC 796 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA---TATAGA 474624 ||||||| |||||||| || | |||| | |||| || ||| | || | | || Sbjct 795 TGATATGAAACATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCGAGT 736 Query 474625 AGCAATACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTTT 474683 || |||||| | || || || ||| | |||| | || || | | || || ||||| Sbjct 735 AG-AATACAAG--GGAGAGAC-AAAGAGTTTTTATCCAGAGGAGGTGTCATCCATGGTCC 680 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGT 474741 | | || ||||| ||| ||| ||| | || ||||| |||| || || |||| || Sbjct 679 TGACAAAGATGAAGGAAATCGCAGAG-GCCTACCTTGG-GAAGACTGTTACCAATGCTGT 622 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 || || || || ||||||||||| ||||| ||||| || || |||||||| |||| Sbjct 621 TGCCACAGTACCTGCCTATTTTAATGACTCTCAGCGTCAGGCTACCAAAGATGCTGGAAC 562 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 || | ||||| || | | | || || ||||| ||||| || || || |||| || Sbjct 561 TATCACTGGTCTCAACATACTTCAAATCATCAATGAGCCAACTGCTGCTGCTATTGCCTA 502 Query 474862 TGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 ||| | || || || || |||| |||||| | |||||||||| || ||| Sbjct 501 TGGCTTAGACAAAAAGGTTGGAGCAGAAAGAAATGTGCTGATCTTTGATTTAGGTGGT 444 >seq76194 Length=1406810 Score = 154 bits (170), Expect = 1e-31 Identities = 504/768 (66%), Gaps = 15/768 (2%) Strand=Plus/Minus Query 475510 TGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGA 475569 ||||||||| |||| ||||| || || | | | |||| ||||||| || | ||| Sbjct 1346686 TGCTAAGCGCACTCTCTCTTCCAGCACCCAGGCCAGTATTGAGATTGATTCCCTCTATGA 1346627 Query 475570 AGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCT 475629 |||||| || | |||| |||||| | || |||||||| | | |||| | Sbjct 1346626 AGGAATCGACTTCTATACCTCTATTACCCGTGCCCGGTTTGAAGAATTGAATGCTGACTT 1346567 Query 475630 CTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT-CAGAGATTCTAAACTTGACAAAT 475688 || | || | || || || || ||| || ||| ||| | ||||| ||||| | Sbjct 1346566 GTTCCGTGGCACCCTGGACCCTGTGGAGAAAGCCCTTCAG-GATGCCAAACTGGACAAGT 1346508 Query 475689 CACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA 475748 | || | ||||| ||||| | || || || ||||| | || || || || ||||| Sbjct 1346507 CTCAGATTCATGATATTGTCTTGGTTGGTGGCTCAACCTGCATCCCCAAGATTC-AGAAA 1346449 Query 475749 TGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCT 475807 | || | | || ||||| || | ||||| | || | || |||||||| ||| Sbjct 1346448 CTTCTCCAGGACTTCTTCAATGGGAAGGAACTAAATAAGAGCATCAACCCTGATGAGGCT 1346389 Query 475808 GTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTA 475867 || ||||| || || |||||||| ||||| ||||| || || | || | |||| | Sbjct 1346388 GTCGCATACGGTGCAGCTGTCCAGGCAGCCATTTTGTCTGGAGA--CAAATCTGAAAATG 1346331 Query 475868 AATAATA-TTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAG 475925 || | ||| ||||| | || ||||| ||||| | || ||||||| | ||| | Sbjct 1346330 TTCAAGACTTGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTG 1346271 Query 475926 GGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTAT 475985 | | |||||| || || | | ||||| | || || ||| | || | | Sbjct 1346270 GAGTCATGACTGTCCTCATCAAGCGTAATACCACCATTCCTACCAAGCAGACACAGACTT 1346211 Query 475986 TTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAA 476045 | |||| || ||||| || || | | ||| ||| || | | |||||||||| | Sbjct 1346210 TCACCACCTACTCTGACAACCAGCCTAGTGTGCTCATTCAGGTTTATGAAGGTGAACGTG 1346151 Query 476046 AATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTAT---TCCTCCTG 476102 | || || ||||| ||| || || | ||| | || ||| || |||||||| Sbjct 1346150 CCGTGACCAAGGATAACAACCTGCTGGGCAAGTTTGAACTCACAGGCATACCTCCTCCTG 1346091 Query 476103 CTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTA 476162 | ||| | || |||||||| |||||||| ||||||||||||||||| || || ||||| | Sbjct 1346090 CCCCCCGGGGTGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAAAGGCATTCTCA 1346031 Query 476163 ATGTTACTGCTTGTGATAA-ATC-TAGTAACAAGAGTAAAAATATAACTATTACAAACAA 476220 ||||| ||||| ||||| | | || || ||||| || || || || || || || | Sbjct 1346030 ATGTTTCTGCTGTGGATAAGAGCACAGGAA-AAGAG-AACAAGATTACCATCACTAATGA 1345973 Query 476221 TCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGC 476268 | || | || | | ||| | ||| |||| |||||| | ||||| Sbjct 1345972 TAAGGGCCGCTTGAGCAAGGAAGACATTGAACGCATGGTTCAAGAAGC 1345925 >seq39809 Length=6989 Score = 109 bits (120), Expect = 4e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || || |||||| | ||| | || |||| || Sbjct 217 TGCAGTTGGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATGGAAA 158 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||||||||||||||| || || | |||| || ||| ||||| | ||||| Sbjct 157 GGTGGAAATAATTGCCAATGATCAGGGGAGCCGAACCACCCCAAGCTATGTCGCCTTTAC 98 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||||| | || || |||||||| || | |||| |||| ||||| || Sbjct 97 TGATACTGAACGATTGATCGGTGATGCTGCAAAGAACCAAGTTGCAATGAATCCCACCAA 38 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCG 474540 || |||||||||| ||| || | ||||| || Sbjct 37 CACGGTTTTTGATGCCAAACGACTTATTGGACG 5 >seq68779 Length=1714688 Score = 98.7 bits (108), Expect = 6e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || || |||||| | ||| | || |||| || Sbjct 679849 TGCAGTTGGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCATGGAAA 679908 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 679909 AGTGGAAATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTAC 679968 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCC 474501 ||| ||||||| | || || |||||||| || | |||| ||| ||||| Sbjct 679969 TGATACTGAACGATTGATCGGTGATGCTGCAAAGAACCAAGTCGCAATGAATCC 680022 >seq45446 Length=1454406 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 || ||| ||||||| ||||||| ||||||||||| |||||| | ||||| || ||||| Sbjct 650330 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACG 650389 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 |||||||| |||| ||||| || | ||||| | | || || ||||| || Sbjct 650390 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 650442 >seq34609 Length=2775773 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| ||| |||| || || | ||| || |||||||||||||||||||| Sbjct 2545786 ATCTTCCAGTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 2545845 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| || ||| ||| || ||||| | | | ||||| || || Sbjct 2545846 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGCTCGACCTCAAGAGTGAT 2545905 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| | |||||| || Sbjct 2545906 GGTCTTCCCTGTCAGGGTCTTCATGAAAATCTG 2545938 >seq25926 Length=4460019 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || || | ||| || |||||||||||||||||||| Sbjct 2859541 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 2859600 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| || ||| ||| | ||||| | | | ||||| || || Sbjct 2859601 ATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGCTCGACCTCAAGAGTGAT 2859660 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | || || ||||| |||||||| || Sbjct 2859661 GGTCTTCCTCGTCAGGGTCTTCACGAAAATCTG 2859693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3264862570043360