Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_020839.1 Length=39573 Score E Sequences producing significant alignments: (Bits) Value seq30943 125 2e-24 >seq30943 Length=355 Score = 125 bits (138), Expect = 2e-24 Identities = 185/254 (73%), Gaps = 15/254 (6%) Strand=Plus/Minus Query 22449 TCATCCTCGAAAGCGGCCTTCAGAGGCGGCATAT-GAAGCCGATACCATTCCTCGGTGAA 22507 ||||| ||||| || |||||| |||||||| | ||||| | ||||| || | | ||| Sbjct 284 TCATCTTCGAAGGCCAGCTTCAGCGGCGGCATGTTGAAGCGG-TACCAGTCGGCCGAGAA 226 Query 22508 CTTGATCGCCCAGATCAGGCCGGGCCC---GTCCTCGGCTTCCTTGATGCCGTATTTGCG 22564 || | | ||| || ||| | |||||||| ||| || |||| | |||| Sbjct 225 TTTTACGGGTGCGATTAGTCCGCCGTCATTGTCCTCGG--TCCG-GAAGCCGAAGATGCG 169 Query 22565 GCCCATGTCCTCGGCCACGGTCCAACCCATGCCGGTCGCGTCGAAAGCGGCGCCGACCAG 22624 ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct 168 CCCCATGTCCTCGGCCACTGTCCAACCCATGCCGGTGGCATCGAAAGCGGCCCCGACCAG 109 Query 22625 TCGCCCCTCGACATGCTCGAGCA--CGGCTCCCACGATCATCTTCTGCTCGTGGCCGGGA 22682 ||| | || | || || || || | | || | ||| ||||||| |||||| Sbjct 108 ACGCGGCGCGCCCTGAAGGATCAACCGAGT---AAGA--AGCTTTTGCTCGTCACCGGGA 54 Query 22683 ACGTTGCGCATCTC 22696 |||||||||||||| Sbjct 53 ACGTTGCGCATCTC 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126395839844400