Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_020840.1
Length=38987
Score E
Sequences producing significant alignments: (Bits) Value
seq6427 161 2e-35
>seq6427
Length=47605
Score = 161 bits (178), Expect = 2e-35
Identities = 244/345 (71%), Gaps = 8/345 (2%)
Strand=Plus/Minus
Query 11367 GCCATTGAATGGACTGACCACACGTTTAACCCCTGGGAGGGCTGCCAGAAGGTGGGACCC 11426
|| ||||| ||| |||||||||||||| || |||||||| ||||||||||| ||
Sbjct 20130 GCGATTGAGTGGTGCGACCACACGTTTAATCCGTGGGAGGGATGCCAGAAGGTTTCGCCT 20071
Query 11427 GGGTGTGACAATTGCTATGCCGAGGCGCGCAATGCCCGTTTCGGTGGGGGCACGGCGCCA 11486
|| || ||| |||| || |||||||||||||| || |||||||| || | ||| |
Sbjct 20070 GGCTGCGACCATTGTTACGCCGAGGCGCGCAACCAGCGCTTCGGTGGCGGTATTGCGACG 20011
Query 11487 AACTGGGGACCAGGAGCCCCGCGCCGTCTCACCTCCAAGGCCAATTGGCGCGCACCGCTC 11546
|| ||||||||||| || ||||| || || || ||||| ||| | ||||| |
Sbjct 20010 AATTGGGGACCAGGCGCGCCGCGGCGCAAGACATCGCTCGCCAACTGGTTCAAACCGCGC 19951
Query 11547 AAATGGGCCAAGCGCGCGGCCGAA----TTCCAGGCAGAGCACGGACGGCGCCAGCGCGT 11602
| |||| |||||| | |||| ||| | | |||| || |||||||||||
Sbjct 19950 AGATGG---CAGCGCGAAG-CGAAGGCGTTCTTTTCGGCCAACGGCCGCCGCCAGCGCGT 19895
Query 11603 CTTTTGCGCCAGCCTGGCTGATGTGTTTGACAATGCCGTGGACCCGGCCTGGCGCGCTGA 11662
|| || || |||| |||||||| ||||||||||| || ||| |||||| || ||
Sbjct 19894 TTTCTGTTCCTCATTGGCGGATGTGTTCGACAATGCCGTTGATCCGCTCTGGCGAGCAGA 19835
Query 11663 CCTATTCGAGCTCATCAGGCAGACCCCAGAGCTGGACTGGCTCCT 11707
| | || | |||||| | || || || || |||||||| ||
Sbjct 19834 ATTGTGGGAATTGATCAGGGACACGCCGGATCTCGACTGGCTGCT 19790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124522361606160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |