Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_020853.1
Length=56958
Score E
Sequences producing significant alignments: (Bits) Value
seq15370 109 2e-19
>seq15370
Length=122281
Score = 109 bits (120), Expect = 2e-19
Identities = 172/244 (70%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 46038 CGCACATGGGATGTGGGTCACATAGAGGGTGCAGCCCTTGGTGCTG-ATTCCCTCACGGG 46096
|||||| || ||| ||||||||||||||||| || | ||| ||| || || | || |
Sbjct 52230 CGCACACGGAGGGTGTGTCACATAGAGGGTGCACCCATCGGT-CTGAATGCCGGCCCGCG 52172
Query 46097 CGGCAAAGGCGATGACGTTCTGTTCGGCATGGCTGGCAAACAGATACTTCATGGGCCGCT 46156
| || || || | || |||||||| || |||||||| ||||| |||||| | || ||||
Sbjct 52171 CAGCGAACGCCAGCACATTCTGTTCAGCGTGGCTGGCGAACAGGTACTTCTTTGGGCGCT 52112
Query 46157 CAAATCGCTCAGGGGTGTCATGGACGCCAACGGGTGGCCCATTGTATCCCGTGAGGCGGA 46216
| || ||| || || | |||||| | ||||| || ||| | || |||||||| |
Sbjct 52111 CGCGTCTATCATCAGTCTCGTTGACGCCGATCGGTGGTCCGTTGAAGCCGGTGAGGCGCA 52052
Query 46217 CTTCGCCATCAGGTCCCAGCAGAACGGCCCCCACTTGGGTTTCATCCTTGGACCGTGTGG 46276
|||| | | || || | ||| | || || || || || ||||||||| |||
Sbjct 52051 CTTCCCGGTTCGGCCCGACCAGCGCAGCGCCGACCTGCGTGCTGTCCTTGGACTTCTTGG 51992
Query 46277 CCGC 46280
||||
Sbjct 51991 CCGC 51988
Score = 96.9 bits (106), Expect = 1e-15
Identities = 78/94 (83%), Gaps = 3/94 (3%)
Strand=Plus/Plus
Query 6106 CATAGGGATTGCCGGTGTCTGGGTGGATGGACGGCGGCATTGCAACCTGCTTGCCGGTGC 6165
||||||| |||||||||| || ||||| || || ||||| || ||||||||||||||||
Sbjct 44681 CATAGGGCTTGCCGGTGTTCGGATGGATCGAGGGTGGCATCGCGACCTGCTTGCCGGTGC 44740
Query 6166 CGAAAAGTTCGATTTCCCAAGTCCAGTGCTTTTT 6199
||||||| ||||| |||||| ||| ||||||
Sbjct 44741 CGAAAAGCTCGATCTCCCAATCCCA---CTTTTT 44771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181976759932800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |