Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq30943 125 2e-24 >seq30943 Length=355 Score = 125 bits (138), Expect = 2e-24 Identities = 185/254 (73%), Gaps = 15/254 (6%) Strand=Plus/Plus Query 17074 GAGATGCGCAACGTTCCCGGCCACGAGCAGAAGATGATCGTGGGAGCCG--TGCTCGAGC 17131 |||||||||||||||||||| ||||||| ||| | || | | || || || | Sbjct 40 GAGATGCGCAACGTTCCCGGTGACGAGCAAAAGCT--TCTT---ACTCGGTTGATCCTTC 94 Query 17132 ATGTCGAGGGGCGACTGGTCGGCGCCGCTTTCGACGCGACCGGCATGGGTTGGACCGTGG 17191 | | || | ||| |||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct 95 AGGGCGCGCCGCGTCTGGTCGGGGCCGCTTTCGATGCCACCGGCATGGGTTGGACAGTGG 154 Query 17192 CCGAGGACATGGGCCGCAAATACGGCATCAAGGAAGCCGAGGAC---GGGCCCGGCCTGA 17248 ||||||||||||| |||| | |||| || ||| |||||||| | ||| || | Sbjct 155 CCGAGGACATGGGGCGCATCTTCGGCTTC-CGGA--CCGAGGACAATGACGGCGGACTAA 211 Query 17249 TCTGGGCGATCAAGTTCACCGAGGAATGGTATCGGCTTC-ATATGCCGCCTCTGAAGGCC 17307 || | | || ||| | | || ||||| | ||||| | |||||||| |||||| Sbjct 212 TCGCACCCGTAAAATTCTCGGCCGACTGGTA-CCGCTTCAACATGCCGCCGCTGAAGCTG 270 Query 17308 GCTTTCGAGGATGA 17321 || ||||| ||||| Sbjct 271 GCCTTCGAAGATGA 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128499506535120