Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_021540.1 Length=69278 Score E Sequences producing significant alignments: (Bits) Value seq66703 89.7 2e-13 >seq66703 Length=1304 Score = 89.7 bits (98), Expect = 2e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 11736 GGTATTGATGACAGGGGTGAGATTATTACCTTCTGGAAACCAGATGACTTCGATAAAGCT 11795 |||||||||||| | ||||| ||| | ||||||| || |||| ||| || ||| | Sbjct 528 GGTATTGATGACCGAGGTGAAATTCTAACCTTCTACAATCCAGGTGAGTTTCATATGGGA 587 Query 11796 TGTCTACGTCCTTGTATGTTCCAACAT-CATTTCACTTTGATTGATGACCAACTATCACT 11854 ||| |||||||||||||| ||| ||||| | ||| | | || | | || | | Sbjct 588 TGTTTACGTCCTTGTATGCATACTCATACATTT-TCGTTGTTAGGTGGCAAGCTTTATTT 646 Query 11855 TACTTCGTATCAGCGTAGTTGTGATGTTCCGTTAGGGCTAAACTTTAACATGATTCAAGT 11914 ||||| | || ||| |||||||| || ||||| | ||| ||||| ||||||||| Sbjct 647 GACTTCATCACAACGTTCATGTGATGTACCATTAGGTCAAAATTTTAATCAGATTCAAGT 706 Query 11915 ATATGTATTCTTGGTTCTAATGGCTCAGATTACAGG 11950 | | || | | ||| |||||||| ||||| || Sbjct 707 GTTTACCTTACTAGCTCTCATGGCTCAAATTACGGG 742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 221356011180280