Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_021557.1
Length=37378
Score E
Sequences producing significant alignments: (Bits) Value
seq14506 540 2e-149
seq25291 269 6e-68
>seq14506
Length=197000
Score = 540 bits (598), Expect = 2e-149
Identities = 421/502 (84%), Gaps = 0/502 (0%)
Strand=Plus/Plus
Query 33614 TGCGCGAGTTCGGTATTTTCGATCAGGCCGGATCGATGATCGCCGTTGCTAAACCCGTCA 33673
||||||||||||| |||||||||||||||||||||||||| || || || || || ||||
Sbjct 136001 TGCGCGAGTTCGGCATTTTCGATCAGGCCGGATCGATGATAGCGGTCGCCAAGCCAGTCA 136060
Query 33674 GCCAGTACAAGCCGACCGCGCTCGAAGGCCAGCTTGAAGACATCCGTTACGAGTTCCAGA 33733
|||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 136061 GCCAGTACAAGCCGACTGCGCTTGAAGGTCAGCTTGAAGACATCCGTTACGAATTCCAGA 136120
Query 33734 TCATCATTGGCGAAAACGCCAATGTAACCTTGCTGGTCGATCCGTCCCTGTTGTTTGCCA 33793
|||||||||| || || |||||||| || ||||||| ||||| || ||| | |||||||
Sbjct 136121 TCATCATTGGTGAGAATGCCAATGTGACGCTGCTGGTTGATCCCTCACTGCTTTTTGCCA 136180
Query 33794 CGCGGGCTTGGGTCGAAAACCGCAAAATTCCGATGGGCCAGCTTATGCGCTTGCCGTGGC 33853
||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||| |||
Sbjct 136181 CGCGGACTTGGGTCGAAAATCGCAAAATCCCGATGGGCCAGCTTATGCGCCTGCCATGGA 136240
Query 33854 TGCCTGTTCTTTCCATGACGCTCTCAAACGCTCCTGGAAATCCGGCCGTGGGCGACAGCT 33913
|||| ||||||||||| |||||||| | ||||| || |||||||| |||||||||| ||
Sbjct 136241 TGCCCGTTCTTTCCATCACGCTCTCCAGTGCTCCCGGCAATCCGGCTGTGGGCGACACCT 136300
Query 33914 ATCTCGTTCCTTCTAACGCCACCGGCATCTGGCTCGCAAATATCGGCAAAATTGCCGAAT 33973
| || |||||||||||||| || ||| ||||| | |||| ||| ||||||||||| |
Sbjct 136301 ACCTTGTTCCTTCTAACGCTACGGGCGTCTGGACAACCAATACCGGGAAAATTGCCGAGT 136360
Query 33974 GGAACGGCACGAACTGGAACTACGTTTTGCCTCCCGATGGCCATGGCATCAGCTTACCAG 34033
|||||||| || |||||| || |||| ||| || ||||| |||||||||||||| ||||
Sbjct 136361 GGAACGGCTCGGGCTGGAATTATGTTTCGCCCCCGGATGGTCATGGCATCAGCTTGCCAG 136420
Query 34034 ACGGCCGCATATTCGAGCGAATAGGTGGCACCTATGTCGAGAAGTTGGCGCTCGATGTAC 34093
| || ||| | |||||||| || | |||| |||| | || ||| ||||||| |||| |
Sbjct 136421 ATGGTCGCGTGTTCGAGCGGATCGCTGGCTCCTACATTGAAAAGCTGGCGCTTGATGCCC 136480
Query 34094 AGTCTGGTAAGTGGAGCTACGC 34115
| || || || |||| ||||||
Sbjct 136481 AATCGGGAAAATGGACCTACGC 136502
>seq25291
Length=77000
Score = 269 bits (298), Expect = 6e-68
Identities = 284/374 (76%), Gaps = 0/374 (0%)
Strand=Plus/Plus
Query 35094 GGTTGGCTACTGAAGGGCAGCAAGTTCGAAGCGCCCGCTGTGGTGGTTCCGACGCTGGAT 35153
|| ||||| ||||| |||| |||||||||| || ||||| |||||||| |||| ||
Sbjct 31635 GGCTGGCTGCTGAATGGCAATGAGTTCGAAGCCCCTGCTGTAGTGGTTCCTTCGCTTGAG 31694
Query 35154 GCGGTCAAGGCCAACCGTATTGAAACCCTGAGGGGCGCCTGTGAAGCAACGATCACAGGG 35213
||| |||| ||| | |||||||| || || || |||||||||| |||||||||
Sbjct 31695 GCGATCAAAGCCGCTCACATTGAAACTCTACGGATAGCATGTGAAGCAAAGATCACAGGC 31754
Query 35214 GGCTTCCAGTCGAGTGCGCTTGGAAGCGATCATACTTATCCGAGCGACATCAAAGCCCAA 35273
|||||| || ||||| ||||| | | ||| || || |||||||||||||| || |||
Sbjct 31755 GGCTTCATCTCAAGTGCCCTTGGGGGGGCTCACACCTACCCGAGCGACATCAAGGCGCAA 31814
Query 35274 ATCAATTTGATGGGTTCTGTGACGGACAGCATCATGCCCGATCTCCCGCCCGACTGGCAA 35333
||||| | ||||||||||| || ||||| |||||||| || || ||| | ||||| |
Sbjct 31815 ATCAACCTAATGGGTTCTGTCACCGACAGTATCATGCCGGACCTTCCGGCAAACTGGACA 31874
Query 35334 ACGCCATTCTGGGTCTGTGATGTCGCCGGTTTGTGGAGCTGGAAAATGCACAACGCCACG 35393
|| ||||| ||||||||||| | || || ||||| ||||| ||||| || ||| |
Sbjct 31875 ACACCATTTTGGGTCTGTGACGCGGCTGGGCTGTGGGCTTGGAAGATGCATAATGCCGCT 31934
Query 35394 CAAATCCAGCAGGCCGGTCGAGACGGCAAGGCACATGTCGTAGTCTGCCAGACGACGCTC 35453
||||||||||| ||||| ||||||||||| || ||| || | | |||||| | ||||
Sbjct 31935 CAAATCCAGCAAGCCGGGCGAGACGGCAAAGCCGCTGTTGTGGCCGCCCAGACCAAGCTC 31994
Query 35454 GCCACACTCACGGC 35467
| | ||| |||||
Sbjct 31995 GGCCAACTGACGGC 32008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119378289105600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |