Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_021783.1 Length=59254 Score E Sequences producing significant alignments: (Bits) Value seq15370 100 1e-16 >seq15370 Length=122281 Score = 100 bits (110), Expect = 1e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 44274 GCGAAACGGTCGGCTACCAGCTTTTTACGGCTTTCCATGTACTTCCACGTTTCAGCCATC 44333 ||||| |||||||| |||| ||| || |||| |||| | ||||| ||||| | |||| Sbjct 15512 GCGAACCGGTCGGCGACCACCTTCTTGCGGCCGACCATAAATTTCCAAGTTTCGGTCATC 15453 Query 44334 GAAGCGCGGGCAGAAGAGTAGTTCGTCTTCGTATAGTCGCGGCTGAACTGCTCGTACGAA 44393 | |||||||| || ||||||||||||| |||||||| | | ||||||||| || Sbjct 15452 GCGGCGCGGGCCGACGAGTAGTTCGTCTCGGTATAGTCCTTGGAAAGCTGCTCGTAGGAT 15393 Query 44394 AGGCCGAGTGATGCGGCGATGTT 44416 | ||| || | || |||||||| Sbjct 15392 ACGCCAAGCAAGGCTGCGATGTT 15370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189317213917440