Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq42836 131 2e-24 seq63175 125 9e-23 seq42862 125 9e-23 seq72240 118 1e-20 seq50089 93.3 5e-13 seq32890 87.8 2e-11 >seq42836 Length=1893264 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 1654017 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 1653958 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||| || || ||| ||||||| |||| | Sbjct 1653957 TGGTTGAGCGCTTGTTGTAATGCGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 1653898 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| || || || ||| |||| Sbjct 1653897 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCCTTGGACGAAATACCGGTGTCTGGGT 1653838 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 1653837 GCACCTGCTTCAGCACCTTGTA 1653816 Score = 113 bits (124), Expect = 5e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | ||||||||| || ||||||||||| || | | Sbjct 1710914 GCTTGGCCAGCTCACCGGGAAGCAGCAGGCGCACCGCCGTCTGGATCTCTCGAGAAGTAA 1710855 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||||||| || ||| | | ||||| |||| | Sbjct 1710854 TGGTTGAGCGCTTGTTGTAATGCGCCAGACGCGACGCTTCGCCGGCAATGCGCTCGAAGA 1710795 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || || ||||||| ||| | |||| ||||||||| ||| |||| Sbjct 1710794 TGTCATTGACGAAGGAATTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCCGGGT 1710735 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||| || |||||||| || Sbjct 1710734 GTACCTGTTTCAGCACCTTATA 1710713 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 1675209 GCTTGGCTAGCTCGCCGGGCAACAGCAGTCGCACGGCCGTCTGGATCTCCCGGGACGTGA 1675150 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || || | || || ||| ||||||| |||| | Sbjct 1675149 TGGTTGAGCGCTTGTTGTAATGGGCTAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 1675090 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 1675089 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCAGTGTCCGGGT 1675030 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| || | ||| ||||| Sbjct 1675029 GCACCTGTTTCAACACTTTGTA 1675008 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 1688880 GCTTGGCTAGCTCGCCGGGCAACAGCAGTCGCACGGCCGTCTGGATCTCCCGGGACGTGA 1688939 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || || | || || ||| ||||||| |||| | Sbjct 1688940 TGGTTGAGCGCTTGTTGTAATGGGCTAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 1688999 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 1689000 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCAGTGTCCGGGT 1689059 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| || | ||| ||||| Sbjct 1689060 GCACCTGTTTCAACACTTTGTA 1689081 >seq63175 Length=1720526 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 43663 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 43604 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| | ||||| |||| | Sbjct 43603 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGATGCCTCGCCCGCAATGCGCTCGAAAA 43544 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 43543 TGTCGTTTACAAAGGAGTTCATGATACCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 43484 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 43483 GGACTTGCTTCAGCACCTTGTA 43462 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||| || || ||||||||||| | | || Sbjct 361152 GCTTGGCCAGCTCCCCGGGTAGCAGCAGGCGTACCGCTGTCTGGATCTCCCTGGATGTGA 361211 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 361212 TAGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGA 361271 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 361272 TGTCGTTGACAAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 361331 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 361332 GGACCTGCTTCAGCACCTTGTA 361353 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 33840 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 33781 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| |||||| ||||||| |||| | Sbjct 33780 TGGTCGAGCGCTTGTTGTAGTGCGCCAGACGCGATGCCTCGCCCGCGATGCGCTCGAAGA 33721 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 33720 TATCGTTCACGAAGGAGTTCATGATGCCCATAGCCTTGGACGAGATGCCGGTGTCCGGGT 33661 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||| ||||| Sbjct 33660 GGACTTGCTTCAGCACTTTGTA 33639 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||| ||||||||||||||||| | | || Sbjct 434697 GCTTGGCCAGCTCCCCGGGCAACAGCAGGCGAACGGCGGTCTGGATCTCCCTGGATGTGA 434756 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 434757 TGGTTGAACGCTTGTTGTAATGGGCCAGGCGCGATGCCTCGCCAGCGATGCGCTCGAAAA 434816 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || || || ||||| ||||||| ||| | |||| ||||||||| |||||||| Sbjct 434817 TATCATTCACGAACGAATTCATGATTCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 434876 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 434877 GGACCTGCTTCAGCACCTTGTA 434898 Score = 120 bits (132), Expect = 4e-21 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| || ||| ||| | |||||| ||||| ||||||||||| | | ||| | Sbjct 451153 TGGCCAACTCCCCGGGCAACAGCAGGCGTACGGCCGTCTGGATCTCCCTGGATGTGATAG 451212 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | ||||||||||| ||||| ||||||| || | |||| Sbjct 451213 TCGAGCGCTTGTTGTAATGCGCCAGACGCGACGCCTCACCCGCGATGCGCTCAAAGATGT 451272 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 451273 CGTTGACAAATGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 451332 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 451333 CCTGCTTCAGCACCTTGTA 451351 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | || |||||||||||||||||||| | | || Sbjct 372616 GCTTGGCCAGCTCCCCAGGCAACAGAAGACGCACGGCGGTCTGGATCTCCCTGGATGTGA 372675 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||||||| |||||| ||||||| || | | Sbjct 372676 TGGTCGAGCGCTTGTTATAATGCGCCAGACGCGATGCCTCGCCTGCGATGCGCTCAAATA 372735 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || || |||||||||| ||||| |||| |||||| || ||| |||| Sbjct 372736 TATCGTTCACGAAGGAGTTCATGATGCCCATCGCCTTGGAGGAGATTCCAGTGTCCGGGT 372795 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 372796 GGACCTGCTTCAGCACTTTGTA 372817 Score = 116 bits (128), Expect = 5e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| || ||| ||| | |||||||||||||||||||||||| | | ||| | Sbjct 484674 TGGCCAACTCCCCGGGCAACAGCAGGCGCACGGCGGTCTGGATCTCCCTGGATGTGATGG 484615 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | ||||| || || |||||| | || || |||| |||| Sbjct 484614 TCGAGCGCTTGTTGTAATGCGCAAGGCGCGATGCCTCGCCTGCAATACGCTCGAAGATGT 484555 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 484554 CGTTGACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 484495 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 484494 CCTGCTTCAGCACCTTGTA 484476 Score = 113 bits (124), Expect = 5e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||||||||||||||| | | | Sbjct 420568 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCGGTCTGGATCTCCCTGGATGTAA 420627 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || |||||||| |||||| ||||||| || | | Sbjct 420628 TGGTCGAGCGCTTGTTGTAATGTGCCAGACGAGACGCCTCGCCCGCGATGCGCTCAAAGA 420687 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| ||||| || ||| || | Sbjct 420688 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATACCGGTGTCCGGAT 420747 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 420748 GGACTTGCTTCAGCACCTTGTA 420769 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||| || ||||||||||| | | | Sbjct 414603 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCTCTGGATGTAA 414544 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || ||||| ||||||| |||| | Sbjct 414543 TGGTCGAGCGCTTGTTATAATGAGCCAGGCGCGATGCCTCACCAGCGATGCGCTCGAAAA 414484 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| || | Sbjct 414483 TGTCGTTGACGAAGGAGTTCATGATGCCCATAGCCTTGGATGAGATGCCGGTGTCCGGAT 414424 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 414423 GGACTTGCTTCAGCACCTTGTA 414402 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 540186 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 540127 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 540126 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGTGACGCCTCGCCCGCGATGCGCTCGAAAA 540067 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||||||| ||| | ||| ||||| || || || | Sbjct 540066 TGTCGTTCACAAAGGAGTTCATGATACCCATGGCCTTAGATGAGATACCAGTATCTGGAT 540007 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 540006 GGACCTGCTTCAGAACCTTGTA 539985 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| || || || ||||| || | | || Sbjct 798693 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGTACAGCCGTTTGGATTTCCCTGGACGTGA 798634 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 798633 TAGTGGAGCGCTTGTTATAATGTGCCAGGCGCGACGCCTCGCCTGCGATGCGCTCGAAAA 798574 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||||| ||||||| ||| | ||| |||||||| || |||| Sbjct 798573 TGTCACTGACAAACGAATTCATGATGCTCATGGCCTTTGAAGAGATGCCGGTATCTGGGT 798514 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| ||||||||||||||| Sbjct 798513 GAACTTGCTTCAGCACCTTGTAGATG 798488 >seq42862 Length=585711 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| | | | |||||||||||| ||||||||||| | | || Sbjct 308898 GCTTGGCCAGTTCTCCGGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 308839 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 308838 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 308779 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || ||||| ||||||| ||| | |||| |||||||| ||| |||| Sbjct 308778 TATCGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 308719 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 308718 GGACCTGCTTCAGCACCTTGTA 308697 Score = 116 bits (128), Expect = 5e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| | | | |||||||||||| ||||||||||| | | ||| | Sbjct 317267 TGGCCAGCTCTCCGGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 317326 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| || | Sbjct 317327 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAATAT 317386 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| || || || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 317387 CGTTCACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 317446 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 317447 CCTGCTTCAGCACCTTGTA 317465 Score = 113 bits (124), Expect = 5e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | ||||||||| || ||||||||||| | | || Sbjct 292846 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGATGTGA 292905 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| | ||||| |||| | Sbjct 292906 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCTATGCGCTCGAAAA 292965 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || ||||| ||||||| ||| | |||| ||||||||| ||| |||| Sbjct 292966 TATCGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 293025 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 293026 GGACCTGCTTCAGCACCTTGTA 293047 Score = 104 bits (114), Expect = 3e-16 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | || |||||||| ||||||||||| | | ||| || Sbjct 338262 GCCAGCTCCCCAGGCAGCAGAAGACGCACGGCCGTCTGGATCTCCCTGGATGTGATGGTC 338321 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | || ||||| || |||||| ||||||| |||| |||||| Sbjct 338322 GAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCG 338381 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || || ||||||| ||| | ||| |||||||| ||| ||||| ||| Sbjct 338382 TTGACGAAGGAATTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGACC 338441 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 338442 TGCTTCAGCACCTTGTA 338458 Score = 104 bits (114), Expect = 3e-16 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | || |||||||| ||||||||||| | | ||| || Sbjct 345937 GCCAGCTCCCCAGGCAGCAGAAGACGCACGGCCGTCTGGATCTCCCTGGATGTGATGGTC 345878 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | || ||||| || |||||| ||||||| |||| |||||| Sbjct 345877 GAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCG 345818 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || || ||||||| ||| | ||| |||||||| ||| ||||| ||| Sbjct 345817 TTGACGAAGGAATTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGACC 345758 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 345757 TGCTTCAGCACCTTGTA 345741 >seq72240 Length=1849522 Score = 118 bits (130), Expect = 1e-20 Identities = 317/478 (66%), Gaps = 14/478 (3%) Strand=Plus/Plus Query 1852159 CGCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 1852218 |||||||| || ||||| | ||| || || |||||||||||||| || | | | Sbjct 884839 CGCAAAGGTGAAAATCTTTCTCTGATCAACGCCTCCAAACTGGGCGTCCACTTTCAAATA 884898 Query 1852219 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTC 1852278 | || || | |||||||| |||||| |||| | ||||| || |||| | || Sbjct 884899 TTCTTCATCCAAGGCCTGCAGCCCCGGGTACAGCAAGCCACTCAGCAGAGGGT---GCTC 884955 Query 1852279 CAT---CTTGACCACCTGAGCGGCGGCCTTTTGCGC--CGTGCCG-GTGCGCACGTGCGC 1852332 || ||| ||||||| ||| | || || | || ||||| | ||| |||| | Sbjct 884956 CACTTGCTTTACCACCTCAGCTCCAGCTTTCTTGGCATCGTGCTGTGTGACCACG---GA 885012 Query 1852333 CGCGAGTCGGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCAC 1852392 | ||| ||||||| || |||| ||| | || | |||||| || ||||| | Sbjct 885013 AGAGAGGCGGTAGACATCCAGCGTGTACTCTTTGCTGAGCTGGTAATCAGTGCCTTTGAT 885072 Query 1852393 AAACTCGAG-TCCGCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACT 1852451 |||| ||| | | || || ||||| || ||| || ||||| |||||||| || || Sbjct 885073 GAACTTGAGCTTCTCCAAG-GGCACCCCAATGCTCTCCAGCATTGCCTTGATCACATTCT 885131 Query 1852452 CGTACCAGCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGG 1852511 | || ||| | || |||| | || |||||||| | ||| ||| || |||| | Sbjct 885132 CATAATAGCTGGTTCGAAGTTCTAGAAGTTCCCACGGAGCCTTCATGTTATCCAGGTATG 885191 Query 1852512 CGTGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTT 1852571 |||||| ||| ||||| || | | ||| ||| || || | || ||||| || | | Sbjct 885192 CGTGCAGGTCCGCAAACAGAACTGTTACCTCACATCCTGCTTTCAGGAAGTCTGCGATCT 885251 Query 1852572 TGAAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATA 1852629 | | |||||||||||||| | | || || ||||| || | || || ||||| || Sbjct 885252 TAGACATGGGCACAAAGTAAGCCACATGTGGCTTGCCTGTAGTTGCTGTCCCCCAGTA 885309 >seq50089 Length=2016447 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| ||| || Sbjct 571376 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 571435 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 571436 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 571495 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 571496 TTCAATATCAA 571506 >seq32890 Length=1087178 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| || || Sbjct 252243 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGACGTT 252302 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 252303 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 252362 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 252363 TTCAATATCAA 252373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6100793958710440