Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq48527 96.9 1e-15
>seq48527
Length=2014000
Score = 96.9 bits (106), Expect = 1e-15
Identities = 189/272 (69%), Gaps = 13/272 (5%)
Strand=Plus/Minus
Query 35824 TGGTCGAGCTTGGCGAGCTGGACGGCACCTTTCGCAAGGCCGACATTGC--CAAGCTGAA 35881
|||| || ||||| ||||| || | ||| || || || || ||||| || ||| | ||
Sbjct 1956112 TGGT-GAACTTGGTGAGCTTGATGCCACATTCCGGAAAGCGGACATCGCGGCAATC--AA 1956056
Query 35882 GGCGTTTATCAGTCAGGACGTG--GACATGCTGCGCCGGCCGTATGACCGGCT--GGAAT 35937
|| ||||||||||| || || ||| || ||| |||||||| |||| || |
Sbjct 1956055 GGGGTTTATCAGTC--GATCTGAAGACGTGTACCGCAAGCCGTATG--CGGCCCAGGCAG 1956000
Query 35938 CGAGGTATCAGCGCCGAACCGTGTTCTTTGCCAGCGTGAACCCTGAACGCTTCCTGGCCG 35997
| | |||||| || ||||| ||||| |||||||| ||| |||| ||| || |
Sbjct 1955999 AGCAGATTCAGCGACGCACCGTATTCTTCGCCAGCGTCAACGACGAACAGTTCTTGCATG 1955940
Query 35998 ACGAAACCGGCAACGTGCGCTGGTGGACCGTGCCGGTAGTCGGCGTGAACTATGACCACG 36057
|| |||||||||| ||| |||||||| | ||||| | || || || | ||||
Sbjct 1955939 ACCCGACCGGCAACGCGCGGTGGTGGACGCTTCCGGTGGAGTGCCTGGACATCAATCACG 1955880
Query 36058 ACATTGACGTGCAGCAGCTGTGGGCTGAAGTG 36089
|| || |||||||| ||||||||||||
Sbjct 1955879 CTATCGATACCCAGCAGCTTTGGGCTGAAGTG 1955848
Score = 96.9 bits (106), Expect = 1e-15
Identities = 327/497 (66%), Gaps = 28/497 (6%)
Strand=Plus/Minus
Query 34666 ACGCGCTGCTGGTGCCTGTGCAGAACATCGACGGCCACCTGGTCAGCCTGCAGGGCATCT 34725
|| ||||||||||||| ||| | | ||||| || | || || |||| |||||
Sbjct 1957298 ACTCGCTGCTGGTGCCGGTGATGCTGGTGAACGGCAACATCGTGTCGCTTCAGGCCATCT 1957239
Query 34726 TCGCCAACGAAAACGCCGAGATTGGCCGCGACCGCGACTATTTGCCAGGCGGCCAGAAGC 34785
| || || ||||| | ||| |||||||| || | |||| ||||||| ||||
Sbjct 1957238 TTCCCGACAAAAACAACCCGATGGGCCGCGATAAGGATTTCATGCCTGGCGGCCGAAAGC 1957179
Query 34786 GTGGCGGGTTCTTCATGCTCG----GCGGCAAGCCTATGGGCGGCAACCCGGTCATTGTC 34841
| || | ||||| ||| ||| || || ||| | |||| | ||| ||| |||
Sbjct 1957178 GCGGTGCGTTCTACATCATCGGCACGCCGCCGGCCGA-GGGC-GAAAC-----CATCGTC 1957126
Query 34842 GTGTGTGAGGGTTATTCGACGGGCGCCAGCATCCACATGGCAACCGGTCACTGCGTGGCC 34901
|| ||||| || | || | ||||| |||||| || ||| | ||||| |||
Sbjct 1957125 GTCGCCGAGGGCTACGCCACCGCCGCCACGATCCACGACGCGACCCGCTGGTGCGTTGCC 1957066
Query 34902 GTGGCGTTCGACGCGGGCAACGTGCCGACCATTGC--CAGAGCCATGCGCGAGCTGTTCG 34959
|||||||||||||| |||||| || | || | || ||||| |||||| ||| | |
Sbjct 1957065 GTGGCGTTCGACGCCGGCAACCTGGTGCCCGTAGCTGAAGAGC--TGCGCGGCCTGCT-G 1957009
Query 34960 GCG-CTGCGACCATCCTGGTGTGCGTGGACAACGACC---AGTTCCACAGCAGCGACAAG 35015
|| | |||| || | | || || ||||||| || || || ||||| |
Sbjct 1957008 CCGACCGCGAATTTCGTTATCGCCGCCGATAACGACCGTTGGTCCCGCATGGGCGAC-AT 1956950
Query 35016 CGA-AACGACGGCGTGCACT---ACGGGCGCCAGGCGGCCAGCTCGGCGAATGCCATCCT 35071
||| ||| |||||| |||| || |||| || || | | | | || | |||
Sbjct 1956949 CGAGAACCCCGGCGTCCACTTCGCCGAGCGC---GCTGCATACGCCGTGCGTGGCCGCCT 1956893
Query 35072 GGTGGTGCCAGCGTTCGACAGCCTGGACGGCAAGCCTACCGACTTCAACGACCTGCACCT 35131
||||||||| | ||||| | ||||||||| || | ||| ||||| |||||| | |
Sbjct 1956892 GGTGGTGCCCGAGTTCGCCGACCTGGACGGGCGCCCGAGCGATTTCAATGACCTGTATCA 1956833
Query 35132 GCGCCAGGGCCTGGACG 35148
|||| |||| | ||||
Sbjct 1956832 GCGCGAGGGGATCGACG 1956816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139155313647840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |