Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq48527 96.9 1e-15 >seq48527 Length=2014000 Score = 96.9 bits (106), Expect = 1e-15 Identities = 189/272 (69%), Gaps = 13/272 (5%) Strand=Plus/Minus Query 35824 TGGTCGAGCTTGGCGAGCTGGACGGCACCTTTCGCAAGGCCGACATTGC--CAAGCTGAA 35881 |||| || ||||| ||||| || | ||| || || || || ||||| || ||| | || Sbjct 1956112 TGGT-GAACTTGGTGAGCTTGATGCCACATTCCGGAAAGCGGACATCGCGGCAATC--AA 1956056 Query 35882 GGCGTTTATCAGTCAGGACGTG--GACATGCTGCGCCGGCCGTATGACCGGCT--GGAAT 35937 || ||||||||||| || || ||| || ||| |||||||| |||| || | Sbjct 1956055 GGGGTTTATCAGTC--GATCTGAAGACGTGTACCGCAAGCCGTATG--CGGCCCAGGCAG 1956000 Query 35938 CGAGGTATCAGCGCCGAACCGTGTTCTTTGCCAGCGTGAACCCTGAACGCTTCCTGGCCG 35997 | | |||||| || ||||| ||||| |||||||| ||| |||| ||| || | Sbjct 1955999 AGCAGATTCAGCGACGCACCGTATTCTTCGCCAGCGTCAACGACGAACAGTTCTTGCATG 1955940 Query 35998 ACGAAACCGGCAACGTGCGCTGGTGGACCGTGCCGGTAGTCGGCGTGAACTATGACCACG 36057 || |||||||||| ||| |||||||| | ||||| | || || || | |||| Sbjct 1955939 ACCCGACCGGCAACGCGCGGTGGTGGACGCTTCCGGTGGAGTGCCTGGACATCAATCACG 1955880 Query 36058 ACATTGACGTGCAGCAGCTGTGGGCTGAAGTG 36089 || || |||||||| |||||||||||| Sbjct 1955879 CTATCGATACCCAGCAGCTTTGGGCTGAAGTG 1955848 Score = 96.9 bits (106), Expect = 1e-15 Identities = 327/497 (66%), Gaps = 28/497 (6%) Strand=Plus/Minus Query 34666 ACGCGCTGCTGGTGCCTGTGCAGAACATCGACGGCCACCTGGTCAGCCTGCAGGGCATCT 34725 || ||||||||||||| ||| | | ||||| || | || || |||| ||||| Sbjct 1957298 ACTCGCTGCTGGTGCCGGTGATGCTGGTGAACGGCAACATCGTGTCGCTTCAGGCCATCT 1957239 Query 34726 TCGCCAACGAAAACGCCGAGATTGGCCGCGACCGCGACTATTTGCCAGGCGGCCAGAAGC 34785 | || || ||||| | ||| |||||||| || | |||| ||||||| |||| Sbjct 1957238 TTCCCGACAAAAACAACCCGATGGGCCGCGATAAGGATTTCATGCCTGGCGGCCGAAAGC 1957179 Query 34786 GTGGCGGGTTCTTCATGCTCG----GCGGCAAGCCTATGGGCGGCAACCCGGTCATTGTC 34841 | || | ||||| ||| ||| || || ||| | |||| | ||| ||| ||| Sbjct 1957178 GCGGTGCGTTCTACATCATCGGCACGCCGCCGGCCGA-GGGC-GAAAC-----CATCGTC 1957126 Query 34842 GTGTGTGAGGGTTATTCGACGGGCGCCAGCATCCACATGGCAACCGGTCACTGCGTGGCC 34901 || ||||| || | || | ||||| |||||| || ||| | ||||| ||| Sbjct 1957125 GTCGCCGAGGGCTACGCCACCGCCGCCACGATCCACGACGCGACCCGCTGGTGCGTTGCC 1957066 Query 34902 GTGGCGTTCGACGCGGGCAACGTGCCGACCATTGC--CAGAGCCATGCGCGAGCTGTTCG 34959 |||||||||||||| |||||| || | || | || ||||| |||||| ||| | | Sbjct 1957065 GTGGCGTTCGACGCCGGCAACCTGGTGCCCGTAGCTGAAGAGC--TGCGCGGCCTGCT-G 1957009 Query 34960 GCG-CTGCGACCATCCTGGTGTGCGTGGACAACGACC---AGTTCCACAGCAGCGACAAG 35015 || | |||| || | | || || ||||||| || || || ||||| | Sbjct 1957008 CCGACCGCGAATTTCGTTATCGCCGCCGATAACGACCGTTGGTCCCGCATGGGCGAC-AT 1956950 Query 35016 CGA-AACGACGGCGTGCACT---ACGGGCGCCAGGCGGCCAGCTCGGCGAATGCCATCCT 35071 ||| ||| |||||| |||| || |||| || || | | | | || | ||| Sbjct 1956949 CGAGAACCCCGGCGTCCACTTCGCCGAGCGC---GCTGCATACGCCGTGCGTGGCCGCCT 1956893 Query 35072 GGTGGTGCCAGCGTTCGACAGCCTGGACGGCAAGCCTACCGACTTCAACGACCTGCACCT 35131 ||||||||| | ||||| | ||||||||| || | ||| ||||| |||||| | | Sbjct 1956892 GGTGGTGCCCGAGTTCGCCGACCTGGACGGGCGCCCGAGCGATTTCAATGACCTGTATCA 1956833 Query 35132 GCGCCAGGGCCTGGACG 35148 |||| |||| | |||| Sbjct 1956832 GCGCGAGGGGATCGACG 1956816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139155313647840