Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_023566.1
Length=56024
Score E
Sequences producing significant alignments: (Bits) Value
seq72559 84.2 8e-12
seq75672 80.6 1e-10
>seq72559
Length=385
Score = 84.2 bits (92), Expect = 8e-12
Identities = 104/141 (74%), Gaps = 6/141 (4%)
Strand=Plus/Plus
Query 5827 GCGGGTACTGGCGCGTCTTCAACGACCAACGCCGCAGGTTATGCCATCGGTGCGACCGTC 5886
|| || || || || || |||||||||||||| | |||||| || |||| | ||||||
Sbjct 234 GCTGGAACGGGTGCCGCTGCAACGACCAACGCCACCGGTTATCCCGTCGGCACAACCGTC 293
Query 5887 ATCACACTGGCGTCTGCCGGCACTGGT---GTCATCAAGGCAGGTGATGTTATCACCTTT 5943
||||| || || || ||||| || ||| || || || ||||| || || |||||
Sbjct 294 ATCACGCTTGCTTCGGCCGGTACCGGTGCGGTTATTCAG---GGTGACGTGATTACCTTC 350
Query 5944 GCCGGTGACGCCAACAAATAC 5964
|||||||| | ||||| |||
Sbjct 351 GCCGGTGATCCGAACAAGTAC 371
>seq75672
Length=926
Score = 80.6 bits (88), Expect = 1e-10
Identities = 200/304 (66%), Gaps = 0/304 (0%)
Strand=Plus/Plus
Query 45701 CAGCACGTCAATGTGATTGACGGAGCGGGCGGGCGTCATCAATTGGGCGATGCTGAATTA 45760
||||||||||| ||||| || || ||||| | || | ||||| | |||
Sbjct 381 CAGCACGTCAACGTGATCGAAGGTCATCATGGGCGCAAGGAACTAGGCGACACAACATTG 440
Query 45761 TCGGCTCCGTCGCTCGATTGGCTCAAATTCGGCATGTCGCTAATCGATCCTAACAACCTG 45820
|| ||||||||||| ||||| |||| ||||| | || ||||| | | ||
Sbjct 441 CAAGCGCCGTCGCTCGAATGGCTTTCGTTCGCAATGTCATATGTTGACCCTAATACCTTG 500
Query 45821 GACCGTGGCGAGTGGATCAGCTTAACGGCTGCATTCAAGCAATCGGGTTGGCTTCATGCT 45880
||| | || || ||| | | |||| || || || || || | |||||| |||||
Sbjct 501 GACAGGGGGGATTGGCTGTCCATAACAGCCGCCTTTAAACAGGCCGGTTGGAACCATGCG 560
Query 45881 GACGATCAGGCGTTGTTCAATATTTGGTCCGAATGGTGCGCGCGTTACGGTTCGAACGAT 45940
||||| || | |||| || || ||||| | |||||||||| ||| || |||
Sbjct 561 GACGAACAAACACTGTTTAACATGTGGTCGCAGTGGTGCGCGCAATACAACGGCAATGAT 620
Query 45941 GTTGCCGAAAACCTGAAACAATGGAATTCGATCCGAGAAACAGAAGTTGGCTGGAAAGCA 46000
|||||| ||||||||| | ||||| || || | | ||| | |||||||| ||
Sbjct 621 CCTGCCGAGAACCTGAAAAACTGGAACAGCATTCGTAATAGTGAAATCGGCTGGAAGTCA 680
Query 46001 ATCC 46004
|||
Sbjct 681 TTCC 684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 178990704174240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |