Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_023693.1
Length=148612
Score E
Sequences producing significant alignments: (Bits) Value
seq4033 150 2e-31
>seq4033
Length=1341
Score = 150 bits (166), Expect = 2e-31
Identities = 511/785 (65%), Gaps = 31/785 (4%)
Strand=Plus/Minus
Query 26015 GCAATCTCTTCCAGGCATGCAACCTTCATACCTTGTTGCTTCTCTATTGCATGAACAAAT 26074
|| || ||||| ||||| || || || | ||| ||| || || || | || |||||
Sbjct 1082 GCGATTTCTTCAAGGCACGCTACTTTTAAACCCTGTACATTTTCAATCGTCTGTACAAAC 1023
Query 26075 TGAGATGCTTCCATAAGACTTTCATGTGTTCCTGTATCCAGCCAAGTGAAACCTCTTCCT 26134
|||||||| |||||||||||| ||||| ||||| ||||| | || || | |||
Sbjct 1022 GATGATGCTTCATGAAGACTTTCATGCGTTCCCGTATCAAGCCATGCAAAGCCACGCCCT 963
Query 26135 AGTT-TACAGACACGTAAAGTCTTT---TCTTTCCAGTACATCTCATTTATATCCGTAAT 26190
| | | || |||| || ||| || || ||||||||||||||| || ||
Sbjct 962 AATAATTCA---ACGTTGAG-CTTACCATCATTTAAGTACATCTCATTTAACGTAGTTAT 907
Query 26191 CTCTAACTCCCCTCTAGCAGAAGGTTTAACGCTCTTAGCTTTCTGTATAACAGAATTATC 26250
|| | ||| || | | || ||||| || || ||| | | ||| ||||||
Sbjct 906 TTCAAGCTCTCCACGATGTGATGGTTTTACCTGTTTCGCTAATTCGACTACACGATTATC 847
Query 26251 GTAAAAGTACAAGCCTGTGATTGCGTAGTTGCtttttggtgtttttggtttttCTTCAAT 26310
||||| || || ||||| | ||| || || |||||| ||| |||||| ||||| ||
Sbjct 846 ATAAAAATATAACCCTGTAACTGCATAATTAGACTTTGGTTTTTCTGGTTTCTCTTCGAT 787
Query 26311 ACTCACCACTGTACCTTCAGAATCAAACTCAACAACACCAAATCTTTCAGGATCATTTAC 26370
| || | || || || |||||||||||||| | || || || || ||
Sbjct 786 TGAAATTGCTTTCATGTCTTTGTCGAATTCAACAACACCAAAACGCTCTGGGTCTTTCAC 727
Query 26371 GTGATACCCAAAGATATTAGCTCCACCATTCTTTTCAATATGTTCTTTAGCAGAATCTAA 26430
||||| ||||| | | || || ||||| | || |||| | |
Sbjct 726 TTGATAACCAAATACCGTTGCCCCCG-----TTTTCC-----TACTC--GCAGCACTTTT 679
Query 26431 AATGCTA---CCAAAACTCTGACCAAAGAATAAATTATCACCTAGCACAAGTGCTACAGA 26487
|| | | | ||| |||||| | | | |||||| || ||||| | |||
Sbjct 678 AAGGGTTTTGCTAAATGATTGACCATAATAAATATTATCGCCAAGCACTAAGCAGACATT 619
Query 26488 ATCTTCACCAATAAAGTTCTCACCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATC 26547
|| | ||||||||| || |||||||| ||||| || | || || || | || |
Sbjct 618 GTCGTTACCAATAAACTTTTCACCAATTATAAATGCCTGCGCCAATCCATCCGGCGAAGG 559
Query 26548 CTGTATTGCATACTGTAGGGAAATACCAAAAGAAGAACCATCACCTA--GAAGATTTACA 26605
||||||||||| | | || || || | ||||| ||||| || |||| |
Sbjct 558 TTGTATTGCATAACTCAAGTTTATGCCGTAATCACTACCATTACCTAACAAACGTTTAAA 499
Query 26606 AAATTAATTTGATCTTCTGGTGTTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCATT 26665
|| || |||||| ||||| || ||||||| ||| || | |||||| | ||||||
Sbjct 498 GCTTTCGTT--ATCTTCCGGTGTCGTGATTATTAATATATCGCGAATTCCCGCTAGCATT 441
Query 26666 AGGACAGAGAGTGGATAATAAATCATAGGTTTATCGTAAATTGGTAATAGTTG-TTTACT 26724
| ||| | ||| ||||| | ||| || |||||||| | ||| | |||||| ||| |
Sbjct 440 AATGTAGATATTGGGTAATACACCATCGGCTTATCGTATACTGGGAGTAGTTGCTTTGAT 381
Query 26725 A-ACCCCTTTAGTAACTGGGTAAAGCCTTGTTCCACTACCACCTGCTAAGATAATACCTT 26783
| ||| | | |||| ||||||||| | || ||| ||| || ||||| ||||| ||||
Sbjct 380 ACACCACGT--GTAAGTGGGTAAAGACGAGTGCCAGAACCTCCAGCTAATATAATTCCTT 323
Query 26784 TCATA 26788
|||||
Sbjct 322 TCATA 318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474970896518400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |