Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_025428.1 Length=59601 Score E Sequences producing significant alignments: (Bits) Value seq15370 125 3e-24 >seq15370 Length=122281 Score = 125 bits (138), Expect = 3e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 37864 TTGTTGACAGCCTCCTCCATCCAGAGCCGGTAGACGTGGTTGGCGAAGCGGTCCGCGACC 37923 ||||||| || || || | ||| || ||||||| | ||||||||| ||||| |||||| Sbjct 15554 TTGTTGATCGCTTCTTCGAGCCACAGGCGGTAGATGATGTTGGCGAACCGGTCGGCGACC 15495 Query 37924 GTCCGCTTGACCACGTTCATGCGCTTCCAGGTTTCCGCCATCGCCGCGCGGGCGCTGGAG 37983 | |||| || ||| ||||| ||||| | |||||| |||||||| ||| Sbjct 15494 ACCTTCTTGCGGCCGACCATAAATTTCCAAGTTTCGGTCATCGCGGCGCGGGCCGACGAG 15435 Query 37984 TAGTTGGTCTGGGTGTAGTCGCGCGCAAGCTGCTCGTAGGACACGCCCAGGGCCGCCGCG 38043 ||||| |||| ||| ||||| | ||||||||||||||| ||||| || || ||| Sbjct 15434 TAGTTCGTCTCGGTATAGTCCTTGGAAAGCTGCTCGTAGGATACGCCAAGCAAGGCTGCG 15375 Query 38044 ATATAGCGGAGCAAACTCTGCTCGAAATTCGCGCCGAGCGGGCCGCCCT 38092 || | ||| || | ||||||||| | | ||||||||| |||||| Sbjct 15374 ATGTTGCGCAGAATGGACTGCTCGAACTCCATGCCGAGCGGAGCGCCCT 15326 Score = 95.1 bits (104), Expect = 5e-15 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 10747 GAACTGCGCCAGTTCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGAAGGACATCGCG 10806 ||||| ||||||||||| || || || ||||||||||| | || ||| | |||| | Sbjct 22171 GAACTCCGCCAGTTCATTGAACGGGTTGAGCGCCTGGAAGAAGAAAAGGCCGCCATCCAG 22112 Query 10807 GACCAGGTGAAGGAGGTCCTGGCCGAGGCCAAGGCGCGGGGCTACGACACCAAGGTCATG 10866 | | | | ||||| || ||| ||| ||||| | || |||||||| ||||||| || Sbjct 22111 GGCGACATCAAGGATGTTATGGGCGAAGCCAAAGGCCGCGGCTACGATACCAAGGCAATC 22052 Query 10867 CGCAAGATCATCGCAGAGCGCA 10888 |||||||||||||| ||||| Sbjct 22051 CGCAAGATCATCGCGATGCGCA 22030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190426594375920