Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq48527 80.6 7e-11 >seq48527 Length=2014000 Score = 80.6 bits (88), Expect = 7e-11 Identities = 260/390 (67%), Gaps = 19/390 (5%) Strand=Plus/Minus Query 8712 GCTTGCAGGCCATCTTCCCGAACGAAAACCCACAGCTAGGGCGTGACCGTGATTATTTGC 8771 |||| ||||||||||| || || ||||| | | | || || || |||| ||| Sbjct 1957252 GCTT-CAGGCCATCTTTCCCGACAAAAACAACCCGATGGGCCGCGATAAGGATTTCATGC 1957194 Query 8772 CTGGCGGCCAGAAGCGCGGATGC-TTCCACGTCATAGGCGGCAAGCCGACTGGCGGAAGC 8830 ||||||||| |||||||| ||| ||| || |||| ||||| |||| | | || || Sbjct 1957193 CTGGCGGCCGAAAGCGCGG-TGCGTTCTACATCAT---CGGCACGCCGCCGGCCGAGGGC 1957138 Query 8831 CCGGTTATTGTCATCTGTGAGGGCTATTCAACCGGCGCGTCAATCCACCAGGCAACCGGC 8890 || ||| || |||||||| | |||| ||| | |||||| | || ||| || Sbjct 1957137 GAAACCATCGTCGTCGCCGAGGGCTACGCCACCGCCGCCACGATCCACGACGCGACCCGC 1957078 Query 8891 TACTGCGTTGTAGTGGCGTTTGATGCCGGTAACGTTCCGACCGTGGCCAAGTTGATGCGC 8950 | ||||||| |||||||| || ||||| ||| | | |||| || | | ||||| Sbjct 1957077 TGGTGCGTTGCCGTGGCGTTCGACGCCGGCAACCTGGTGCCCGTAGCTGAAGAGCTGCGC 1957018 Query 8951 CAGCAG-TTCGGACGCGCAACAATTGTTGTGGCAGCCGATAACGACCAGTGG-CACGAA- 9007 | | | | ||| ||| | | ||| | || ||||||||||||| ||| | || | Sbjct 1957017 GGCCTGCTGCCGAC-CGCGAATTTCGTTATCGCCGCCGATAACGACCGTTGGTCCCGCAT 1956959 Query 9008 -GATGGCAAGCAAAATGATGGCGTTCACTACGC---GCGCCAGGCCGCA-ACCACATGCG 9062 | | || | || ||||| |||| ||| |||| || ||| || | ||| Sbjct 1956958 GGGCGACATCGAGAACCCCGGCGTCCACTTCGCCGAGCGC---GCTGCATACGCCGTGC- 1956903 Query 9063 GTGGCCTGCTGGTGGTTCCGAAGTTCGCCG 9092 |||||| |||||||| || ||||||||| Sbjct 1956902 GTGGCCGCCTGGTGGTGCCCGAGTTCGCCG 1956873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135277277635920