Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq38074 134 4e-27 >seq38074 Length=177082 Score = 134 bits (148), Expect = 4e-27 Identities = 311/462 (67%), Gaps = 14/462 (3%) Strand=Plus/Plus Query 35307 GGGGCCTCTTTCATTTCACCCATGAGGAACAATGAACGACGAACTTAGAAACGCCATCAA 35366 |||||| |||||||||| ||| ||| |||||| | ||| | | ||||| || Sbjct 99569 GGGGCCCTTTTCATTTCAG----GAGAAACCATGAACACCAGACTAGCAGAGGCCATTAA 99624 Query 35367 CGCTGAGGCTAAGCGGATTGGAGCTGACCCGCTCGATTTCGCCACGGCCATGTCGTATGA 35426 || ||||| | || ||||| ||| |||| || | ||||| | |||||| || || Sbjct 99625 GGCCGAGGCACAACGAATTGGCGCTAACCCCGCAGACCTTGCCACCGTCATGTCCTACGA 99684 Query 35427 AACTGGCGGCACATTCGACCCATGGAAGAAGGGTCCGACGACCCAGTGGGGCCAGCACAT 35486 |||||||||||| ||||| || ||||| |||||||||||||| || |||||| ||| Sbjct 99685 AACTGGCGGCACCTTCGATCCTTGGAAAAAGGGTCCGACGACGCAATGGGGCGTCCACCG 99744 Query 35487 CGGCTTCATCCAAATGGGTGGCCCGCAGCGCAAGCAGTTCGGCTACTCG-CCCGACAAGT 35545 ||| | ||||| |||||| || ||||| | | | | ||| ||| | | | Sbjct 99745 TGGCCTGATCCAGATGGGTCAGCCTCAGCGTGACAAATACAACTA-TCGAGAGGGGATGC 99803 Query 35546 CCATCACACAGCTCGTGGCATCGTCCGCTGACTATCTGGTCGCCAACGGCTTCAAGCCGG 35605 | || | ||| || | ||||| |||| || |||| || |||||||| | Sbjct 99804 CGATTGAGGACGCCGTTGCGGCCTCCGCGAACTACCTCGTCGATGCAGGTTTCAAGCCCG 99863 Query 35606 GGATGAGTGGGATGGACCTGTACTCCACAATCAACG-CTGGTGCCCCGGGCCG-----CT 35659 | ||| | | || |||||||| | ||||||| | || || |||| | | Sbjct 99864 GAATGGGCCTCCTCGAAATGTACTCCGCGATCAACGCCGGGGGCATCGGGGAGAAGTATT 99923 Query 35660 ACAGCGCCTCTGACGCTAACAATGGTGGCGCTCCAGGCGACGTGAGGGACAAGTGGGAGA 35719 || || || ||||| ||||| |||||||| ||| ||| |||||||| || || Sbjct 99924 ACGGCCGATCCGACGCCGGTAATGGGGGCGCTCCGGGCACCGTTCGGGACAAGGTGGCGA 99983 Query 35720 ACCAGATGGCAGGGCAC-CGCAGGAACGCGGCGGCTCTCCTC 35760 |||||||| ||| ||| ||| ||| || | ||| |||||| Sbjct 99984 CCCAGATGGAAGGCCACAAGCA-GAAGGCCGTGGCGCTCCTC 100024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146041784851200