Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq36501 105 6e-18
seq75383 102 8e-17
>seq36501
Length=2370580
Score = 105 bits (116), Expect = 6e-18
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564
|||| ||| ||||| | |||||||||||||||||| ||| |||||| || ||||| |||
Sbjct 2283008 TACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAAGTTCTGCTGGTTG 2282949
Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|| |||||||| || | |||||| |||||||||||||
Sbjct 2282948 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 2282911
>seq75383
Length=1910755
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || ||||||||||| || ||| ||| |||||| |||||||| |||| |
Sbjct 168971 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCA 168912
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | ||| || ||||| || ||||||||||| || || || || |
Sbjct 168911 AAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCTTGTATCTTCACCTTGACA 168852
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || |||||||||| || | || | ||||||||||| || || |||
Sbjct 168851 TTCTCGATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGTTTTACCAGTGAGGGTCTTT 168792
Query 132110 ATGAAAATCTGCAT 132123
| || ||||||||
Sbjct 168791 ACAAAGATCTGCAT 168778
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|||||||| |||| || | | ||||| || || ||||||||||| || ||| ||
Sbjct 170136 CAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCG 170077
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
| |||||| |||||||| |||| | |||| || | ||| || ||||| || ||||| ||
Sbjct 170076 CCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTC 170017
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||| || || || || | | || | || || | |||||||| || | ||
Sbjct 170016 TTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGT 169957
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || |||| || || | ||| ||||||||
Sbjct 169956 GATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 169918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476150555275200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |