Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq72786 105 1e-17 >seq72786 Length=644084 Score = 105 bits (116), Expect = 1e-17 Identities = 119/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 214068 TTCCCGAAAAGTT-ACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTC 214126 |||| ||| | || | |||| || |||| | ||| | ||||| || ||||| ||| | Sbjct 78710 TTCCTGAACACTTGAAGTTT-GCTGTGGGCCAGGAGGTCTTTGGTCTGGTGCCTGGTCTG 78652 Query 214127 ATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAACAA 214186 ||| |||| |||| || |||||| | || |||||||| || || || ||||| |||||| Sbjct 78651 ATGATGTATGCCACCATTTGGCTGCGGGAACACAACAGAGTGTGTGATGTGCTTAAACAA 78592 Query 214187 GAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 ||||| || |||||| ||| || ||| ||||||||| Sbjct 78591 GAGCATCCAGAATGGGGCGATGAGCAGTTGTTCCAGA 78555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722641691116800