Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq39996 102 1e-16
>seq39996
Length=45000
Score = 102 bits (112), Expect = 1e-16
Identities = 257/382 (67%), Gaps = 8/382 (2%)
Strand=Plus/Plus
Query 14050 CACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAAT 14109
|||| || || ||| || || ||||| || || || || ||| |||||| | |||
Sbjct 6565 CACGACGACCTGACGGTCGAAACGACCGGGACGCAGAAGTGCGGGGTCAAGAACGTCAGG 6624
Query 14110 GCGGTTCGTCGCCGCGATGACAACGATGCCCGTC--TCGTTATCAAAGCCATCCATCTCA 14167
||||| || || ||||||| | |||||| || ||| || ||||| ||||| ||
Sbjct 6625 ACGGTTGGTGGCGGCGATGAGGATGATGCCT-TCATTCGCC-TCGAAGCCGTCCATTTCG 6682
Query 14168 GTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCAT-ACCACCCGCACT 14226
|| || || || | || |||||||| || || || | | || | ||| || |
Sbjct 6683 ACCAGCAGCTGGTTCAGCGTCTGTTCGCGCTCGTCGTTACC-GCCACCAAGACCGGCGCC 6741
Query 14227 GCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACG 14286
|| || ||||||||||| ||||| |||||||| | ||| || ||| ||| |
Sbjct 6742 ACGATGGCGGCCGACGGCGTCGATTTCGTCGATGAAGATGATGCAGGGTGCATTCTTCTT 6801
Query 14287 GGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAA 14346
||| || || || || ||||| | | || ||||| || || ||||| ||||| ||
Sbjct 6802 GGCTTGCTCGAACATGTCACGCACGCGGCTTGCGCCGACGCCGACGAACATTTCCACGAA 6861
Query 14347 ATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGA 14405
| | ||||| || | || ||| || || || | |||||| |||| || || || |
Sbjct 6862 GTCCGAACCGGAA-ATGGTGAAGAACGGCACATTGGCTTCACCGGCGACGGAACGCGCCA 6920
Query 14406 GGAGGGTCTTCCCCGTCCCTGG 14427
| || ||||| ||||| || ||
Sbjct 6921 GAAGCGTCTTACCCGTACCGGG 6942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 617837482379200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |