Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq39996 98.7 1e-15
>seq39996
Length=45000
Score = 98.7 bits (108), Expect = 1e-15
Identities = 254/378 (67%), Gaps = 12/378 (3%)
Strand=Plus/Plus
Query 9517 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9576
|| || ||| || || ||||| ||||| || || ||| ||||| | ||| || ||
Sbjct 6571 GACCTGACGGTCGAAACGACCGGGACGCAGAAGTGCGGGGTCAAGAACGTCAGGACGGTT 6630
Query 9577 CGTCGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAA 9633
|| |||||||||| | || ||| ||||| || || || ||||| || ||
Sbjct 6631 GGTGGCGGCGATGAGGATGATGCCT---TCATTCGCCTCGAAGCCGTCCATTTCGACCAG 6687
Query 9634 AAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT-ACCACCAGCACTGCGTT 9692
|| ||||| | || ||||| || || || || | | || | ||| || | || |
Sbjct 6688 CAGCTGGTTCAGCGTCTGTTCGCGCTCGTCGTTACC-GCCACCAAGACCGGCGCCACGAT 6746
Query 9693 GCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCG 9751
| || ||||| || || || || ||||||| |||||| ||| ||| ||| | ||
Sbjct 6747 GGCGGCCGACGGCGTCGATTTCGTCGATGAAGATGATGCAGGGTGCATTCTTCTTG-GCT 6805
Query 9752 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9811
|| || | || || || || | ||||| || || || ||||| ||||| ||||
Sbjct 6806 TGCTCGAACATGTCACGCACGCGGCTTGCGCCGACGCCGACGAACATTTCCACGAAGTCC 6865
Query 9812 GCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9870
| ||||| || | || ||| || ||||| | |||||| || | || || || |||||
Sbjct 6866 GAACCGGAA-ATGGTGAAGAACGGCACATTGGCTTCACCGGCGACGGAACGCGCCAGAAG 6924
Query 9871 AGTCTTACCCGTACCTGG 9888
|||||||||||||| ||
Sbjct 6925 CGTCTTACCCGTACCGGG 6942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582697078436800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |