Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq64303 84.2 3e-11 >seq64303 Length=392065 Score = 84.2 bits (92), Expect = 3e-11 Identities = 191/284 (67%), Gaps = 10/284 (4%) Strand=Plus/Minus Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC 14327 ||| || | ||||| || ||||| ||||| ||||| ||||||||| | ||| | || | Sbjct 198721 TGGGTCAAAGACACCTATAGCCCTGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTC 198664 Query 14328 G--GGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCA 14385 ||| ||| || | ||| ||| |||||| ||| ||| |||||| |||| Sbjct 198663 CATGGATGCCTGGCTCTGTTCCCTACCACCCCAAGTATCACATCTCAGACATGACTGCCA 198604 Query 14386 AGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACC 14445 | |||| | ||||||||||| | ||||||| ||| ||| | ||||| | || Sbjct 198603 TCGCCAGGCTGGTCAAGTGGCAGGGCCACGAGGGAGATGTCAGCATGGGGGCACCTTATG 198544 Query 14446 CGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGT 14505 | || ||| || ||||| | ||||||||||| | ||| |||| ||| || | | Sbjct 198543 CACCCTGCTCTGGAATCCATCAGCGGGCCATCTGCATTTATGGGGCCGGGGACCTGCACT 198484 Query 14506 GG---CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 || || ||| || ||||| || || |||||||| ||| Sbjct 198483 GGATTCTCCAGA---ACCATCACCTCTTGGCAAACAAGTTTGAC 198443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658102528563200