Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq12156 154 4e-33
>seq12156
Length=2201700
Score = 154 bits (170), Expect = 4e-33
Identities = 237/337 (70%), Gaps = 1/337 (0%)
Strand=Plus/Plus
Query 39377 CTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCG 39436
||| ||||||||| |||| ||||||| | ||||||| || ||| ||| | ||| |
Sbjct 143216 CTGTAGTGGTCAAGTAAAATTGGCCACGGTTTTAGAGTCATT-CCAATATAAACGTTCTG 143274
Query 39437 ATTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAA 39496
| || ||||| | ||||||||||||||||| || ||||| | ||||||||||||
Sbjct 143275 ACTCATTTGGCGTTAACCCACCATTATATTGATGGGGTCTGGTCTCACTGTAATATCCAG 143334
Query 39497 CGATATAGTCCGTTATTGCGTGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGGCA 39556
||| || | || || | | | |||| || | || | |||| || | || || |
Sbjct 143335 TGATGTAATTTGTGATCTCTTTATCTGCTTCTGTAAAATTCCCATAACCACTGGCGGGTA 143394
Query 39557 CCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTTTC 39616
||| || |||| ||| || ||||| ||||||||||| ||||||||| || || |
Sbjct 143395 TCCACTCAGATTTCAAACTTCTAAAGAAACGCTCCATTGGTGCGTTATCCCAACAATTCC 143454
Query 39617 CACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCCTGC 39676
| || ||||||||||| ||| ||| | | ||| | ||| || | ||| | | ||
Sbjct 143455 CGCGACGACTCATACTTTGCTCAATCTGAAGACGCCATATTAATTGTCTGAATTTCAAGC 143514
Query 39677 TCGTATAATGACTGCCTTGATCGCTGTGGAACATCAC 39713
|||| ||||| |||||||||||||| | |||||
Sbjct 143515 TCGTGTAATGTGAACCTTGATCGCTGTGATATATCAC 143551
Score = 152 bits (168), Expect = 1e-32
Identities = 236/336 (70%), Gaps = 1/336 (0%)
Strand=Plus/Plus
Query 16753 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 16812
|| ||||||||| |||| ||||||| | ||||||| || ||| ||| | ||| ||
Sbjct 143217 TGTAGTGGTCAAGTAAAATTGGCCACGGTTTTAGAGTCATT-CCAATATAAACGTTCTGA 143275
Query 16813 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 16872
|| ||||| | ||||||||||||||||| || ||||| | ||||||||||||
Sbjct 143276 CTCATTTGGCGTTAACCCACCATTATATTGATGGGGTCTGGTCTCACTGTAATATCCAGT 143335
Query 16873 GATATAGTCCGTTATTGCGTGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGGCAC 16932
||| || | || || | | | |||| || | || | |||| || | || || |
Sbjct 143336 GATGTAATTTGTGATCTCTTTATCTGCTTCTGTAAAATTCCCATAACCACTGGCGGGTAT 143395
Query 16933 CCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTTTCC 16992
||| || |||| ||| || ||||| ||||||||||| ||||||||| || || ||
Sbjct 143396 CCACTCAGATTTCAAACTTCTAAAGAAACGCTCCATTGGTGCGTTATCCCAACAATTCCC 143455
Query 16993 ACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCCTGCT 17052
|| ||||||||||| ||| ||| | | ||| | ||| || | ||| | | |||
Sbjct 143456 GCGACGACTCATACTTTGCTCAATCTGAAGACGCCATATTAATTGTCTGAATTTCAAGCT 143515
Query 17053 CGTATAATGACTGCCTTGATCGCTGTGGAACATCAC 17088
||| ||||| |||||||||||||| | |||||
Sbjct 143516 CGTGTAATGTGAACCTTGATCGCTGTGATATATCAC 143551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132038653992000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |