Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_028743.1 Length=48594 Score E Sequences producing significant alignments: (Bits) Value seq23535 100 9e-17 >seq23535 Length=854 Score = 100 bits (110), Expect = 9e-17 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 817 TTATGTGTTTTCCGGACTTCGGCATAACTTAGATAGCATCAAATCTAAAGCCCGTATTTT 876 ||||| ||| | || || ||||||||| || | ||||| ||||||||||| |||||||| Sbjct 396 TTATGGCTTTGCTGGTCTACGGCATAACCTAAACAGCATTAAATCTAAAGCGCGTATTTT 455 Query 877 GATTGCGTGGATAGATGAAGCAGAAACAGTAAGCGAAACTGCTTGGCGGAAATTAATTCC 936 | || ||| | ||||| || ||| || || ||||||||| |||||| | || Sbjct 456 GCTTTGCTGGGTTGATGAGGCTGAAGATGTTTCAGAGCTTGCTTGGCGTAAATTACTACC 515 Query 937 AACCGTGCGTGAGAATAATTCCGAAATATGGGTAACTTGGAACCCGGAAA 986 || |||||||| |||| || || | ||| | || ||||| || |||| Sbjct 516 CACTGTGCGTGAAGATAACTCAGAGGTTTGGATTACATGGAATCCTGAAA 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155236534703040