Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_028799.1 Length=66708 Score E Sequences producing significant alignments: (Bits) Value seq66703 95.1 5e-15 >seq66703 Length=1304 Score = 95.1 bits (104), Expect = 5e-15 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 12052 GGTATTGATGACAGGGGTGAGATTATTACCTTCTGGAAACCAGATGACTTCGATAAAGCT 12111 |||||||||||| | ||||| ||| | ||||||| || |||| ||| || ||| | Sbjct 528 GGTATTGATGACCGAGGTGAAATTCTAACCTTCTACAATCCAGGTGAGTTTCATATGGGA 587 Query 12112 TGTTTACGTCCTTGTATGTTCCAACAT-CATTTCACTTTGATTGATGACCAACTATCACT 12170 |||||||||||||||||| ||| ||||| | ||| | | || | | || | | Sbjct 588 TGTTTACGTCCTTGTATGCATACTCATACATTT-TCGTTGTTAGGTGGCAAGCTTTATTT 646 Query 12171 TACTTCGTATCAGCGTAGTTGTGATGTTCCGTTAGGGCTAAACTTTAACATGATTCAAGT 12230 ||||| | || ||| |||||||| || ||||| | ||| ||||| ||||||||| Sbjct 647 GACTTCATCACAACGTTCATGTGATGTACCATTAGGTCAAAATTTTAATCAGATTCAAGT 706 Query 12231 ATATGTATTCTTGGTTCTAATGGCTCAGATTACAGG 12266 | | || | | ||| |||||||| ||||| || Sbjct 707 GTTTACCTTACTAGCTCTCATGGCTCAAATTACGGG 742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 213139760963880