Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq66703 109 4e-19 >seq66703 Length=1304 Score = 109 bits (120), Expect = 4e-19 Identities = 195/282 (69%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 36822 GTATTTGGTCTTCATAAATGTGCGCATTTACTATCTTATGAAACGCTCTGCCAGGTTCTA 36881 ||| ||| ||||||||||| || |||||||| ||||||||| | ||| | || | || Sbjct 804 GTAATTGATCTTCATAAATATGTGCATTTACGATCTTATGATAAGCTTTTCCGGCCTCGT 745 Query 36882 GTCCAGTTATTTGAGCAACTATAGCTAGGAATGCGTACACTTGTACCATGTTGAAGTTAA 36941 | || || |||||||| | | |||||| || | ||||||| | | || || || Sbjct 744 GGCCCGTAATTTGAGCCATGAGAGCTAGTAAGGTAAACACTTGAATCTGATTAAAATTTT 685 Query 36942 GTCCTAACGGTACGTCACAAGAGCGCTGAGTAGCGTTAAGGTACAGTTTACTATTTAGTA 37001 | ||||| ||||| ||||| || || || | | | | || || || | | || | Sbjct 684 GACCTAATGGTACATCACATGAACGTTGTGATGAAGTCAAATAAAGCTTGCCACCTAACA 625 Query 37002 TAGAGAACTGGAAG-TTGTACATACAAGGGCGTAGGCAGCCCTGGTCGAACTCGCCTGGA 37060 || || || | | | | ||||||||| |||| || ||| | ||||| |||||| Sbjct 624 ACGA-AAATGTATGAGTATGCATACAAGGACGTAAACATCCCATATGAAACTCACCTGGA 566 Query 37061 TTCCAGTAGCTTAGAATTTCGCCACGGTCGTCAATCCCCTTT 37102 || || || |||||||||| || ||||| ||||| || ||| Sbjct 565 TTGTAGAAGGTTAGAATTTCACCTCGGTCATCAATACCGTTT 524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 371166705787480