Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_029046.1
Length=50827
Score E
Sequences producing significant alignments: (Bits) Value
seq57075 2085 0.0
seq25291 354 3e-93
seq17619 82.4 2e-11
>seq57075
Length=390000
Score = 2085 bits (2312), Expect = 0.0
Identities = 2218/2917 (76%), Gaps = 55/2917 (2%)
Strand=Plus/Plus
Query 22073 CCTCCAAGGTACCCCATGCCCGTCCTAAAGAACGCGCGGCACGAGAAGTTCGCGCAAGCG 22132
|| ||||||| |||||||| || || ||||| || |||||||||| |||||||||| |
Sbjct 96074 CCCCCAAGGTTACCCATGCCAGTACTCAAGAATGCACGGCACGAGACTTTCGCGCAAGGG 96133
Query 22133 TTGTCCAAAGGCAAGACAGCAGATGACGCATATGCAGA-GGCAGGGTTCAAACCCGACCG 22191
||| | || || | |||||| ||||| || || |||| ||| |||||||| || || |
Sbjct 96134 TTGGCAAAGGGGATGACAGCGGATGAAGCGTAC-CAGAAGGCGGGGTTCAAGCCTGATAG 96192
Query 22192 TGGCAATGCTTCGCGCTTACAGCAGAAAGACAACATCAGACAACGCGTCGCCGAGCTTTT 22251
||||| || ||||| |||||||||| |||| ||| |||||||||| | ||| ||||
Sbjct 96193 GGGCAACGCATCGCGTCTACAGCAGAATGACAGCATTCGACAACGCGTGTCTGAGTTTTT 96252
Query 22252 GGAATGGGAGCAGACGGTGGAGCGCAAAGCCACCGAGAAGGCCATAGACAAGCTCGCCAT 22311
|||||||||||| || || || |||| ||||| ||||||||| |||| ||||| || ||
Sbjct 96253 GGAATGGGAGCAAACAGTCGAACGCAGGGCCACAGAGAAGGCCGTAGAGAAGCTTGCTAT 96312
Query 22312 CACGAAAGAGCGCGTCCTGGCAGAGCTCGCCAAGATCGGGTTCGCCGATATCCGCAAGGC 22371
||| || ||||| || |||||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 96313 CACCAAGGAGCGGGTATTGGCAGAGCTTGCCAAGATCGGCTTCGCGGACATCCGTAAGGC 96372
Query 22372 GATCAAATGGCAGGGCACGCTGGTGACCGAGGAAGACAACCCGGAAGGCGGTGATGTCCT 22431
|||| |||||| || |||||||| ||||| || || ||||| || ||||| || || ||
Sbjct 96373 TATCAGATGGCAAGGGACGCTGGTCACCGAAGAGGATAACCCCGATGGCGGCGACGTGCT 96432
Query 22432 CGTGATCAAGAACGTCGTCACGAACAACGTCCAGCTGATTTCCAGCGATGAGATCGACGA 22491
|| |||||||| || || || |||||||||||||| ||||| || || ||||| |||||
Sbjct 96433 GGTCATCAAGAATGTGGTGACCAACAACGTCCAGCTCATTTCGAGTGACGAGATAGACGA 96492
Query 22492 CGACACAGCTGCAGCCATTTCCGAGATCAGCCAGAATTCGACGGGCGGCATCAAGGTCAA 22551
|||||| || | ||||| | ||| |||||||||| ||||||||||||||||| ||||
Sbjct 96493 CGACACGGCCGGTGCCATAGCTGAGGTCAGCCAGAACGCGACGGGCGGCATCAAGATCAA 96552
Query 22552 GTTCCACGACAAGAAGGGCGCGCTCGTGGATATCGGGAAGCACCTTGGCATGTTCGTCGA 22611
| | ||||| ||||||| ||| || || |||||||| |||||||| ||||||||||| ||
Sbjct 96553 GCTTCACGATAAGAAGGCCGCACTGGTCGATATCGGCAAGCACCTGGGCATGTTCGTTGA 96612
Query 22612 GCGACACGAGCACTCCGGACCTGACGGCGCCCCGATACAGACCGAGACAAGAACATGGCG 22671
||| || ||||| ||||| || || || | ||| |||||||| ||||| || ||||||||
Sbjct 96613 GCGCCATGAGCATTCCGGCCCAGATGGTGGCCCCATACAGACAGAGACGAGGACATGGCG 96672
Query 22672 GGAAGTGCTGCGC--AGCGAA-AAGAGCTAGACGCCACCACCCATCTTACCAACCCTGCG 22728
|| || ||||| || || ||| || |||| || || || |||||||| ||
Sbjct 96673 AGAGGTTCTGCGGCAAGAGACGAAGGACTGATCGCCGCCGCCACGCTGACCAACCCCGCA 96732
Query 22729 CTTCACGAGTTTTGGGAACAGGTCTTCCTCGGGCAGGCAGACATCGCGGTTCTCCACGGT 22788
|| || || |||||| |||||||| ||||| || ||||| || || | |||||
Sbjct 96733 CTCTTTGACTTCTGGGAAAAGGTCTTCTTCGGGGAGAATGACATTGCCGTCTTGCACGGC 96792
Query 22789 GGGCGCTCAAGCTCAAAGACGCGAGACACCGCGTGCCAGCTGGTGCGCCTGGTCGACCAC 22848
|| ||||| || || |||||| ||||||| || ||||| ||||| ||||||||||| ||
Sbjct 96793 GGCCGCTCCAGTTCGAAGACGAGAGACACAGCCTGCCAACTGGTTCGCCTGGTCGAGCAT 96852
Query 22849 GTCGGCGTCAAGATGCGGGTTCTCTGCATCCGTCGCTTCCAAAACCGCATTCAGGACTCG 22908
||| ||||||||||||| || | |||||||| || || || |||||||||||||| |||
Sbjct 96853 GTCCGCGTCAAGATGCGCATTATGTGCATCCGGCGTTTTCAGAACCGCATTCAGGAATCG 96912
Query 22909 GTCTATACCGAACTGAAGTGGGCGATCGCTCATCTCGGGCT-GAGCAAAGCCTTCGACGT 22967
|| || ||||||||||| ||||| |||| |||||||||||| ||| | |||||||| ||
Sbjct 96913 GTATACACCGAACTGAAATGGGCTATCGGTCATCTCGGGCTACAGC-ATGCCTTCGATGT 96971
Query 22968 CCAGAAGACGACGATCATT--CATCGCAGGACCGGCGCGGAGTTCATCTTCTACGGCATC 23025
|||||||||||| |||||| |||||| |||||||||||||||||| |||||||| |||
Sbjct 96972 CCAGAAGACGACCATCATTCACATCGC--GACCGGCGCGGAGTTCATATTCTACGGGATC 97029
Query 23026 GAGCGGAACCTTGAGGACATCAAGGGCACGTCCGACGTCGACATCCTGTGGGTGGAAGAA 23085
||||| ||||||||||| ||||||||||||||||| ||||||| || ||||| |||||
Sbjct 97030 GAGCGCAACCTTGAGGAAATCAAGGGCACGTCCGATATCGACATTCTCTGGGTTGAAGAG 97089
Query 23086 GCCGAGAAGCTGACCGAGGAGCAATGGACGGTCATCGGCCCGACCATCCGCAAGGAAGAC 23145
|| |||||||| || | || || ||| | ||||| | || || ||||| |||||||||
Sbjct 97090 GCGGAGAAGCTAACTGCAGATCAGTGGGCCGTCATTGCGCCAACAATCCGTAAGGAAGAC 97149
Query 23146 AGCCTGGCGATCCTGCTCTTCAACCCGAAGCTGGTCACCGACTACGTCTGGAAGAACTTC 23205
||||| ||||||||||| |||||||||||| ||||||| || ||||||||||||||||||
Sbjct 97150 AGCCTTGCGATCCTGCTGTTCAACCCGAAGATGGTCACGGATTACGTCTGGAAGAACTTC 97209
Query 23206 GTCGTCAACACGCCGCCGCACTGCGTCGTCAAACAGATCAACTACACCTCGAACCCGTTC 23265
|| ||||| |||| || ||||| || || | ||||| |||| ||| ||||||||||
Sbjct 97210 GTAATCAACCCGCCACCACACTGTGTGGTGCATAAGATCGACTATACCGAGAACCCGTTC 97269
Query 23266 CTATCCTCCAAGGCGCTGCGCGATATCGCGGCGATGCAGGAACGTGACCCGGAGTTGTTC 23325
|| || || || |||||||||||| |||||||| || || ||||| ||| | |||
Sbjct 97270 CTTTCAGAGAAAGCCAAGCGCGATATCGCAGCGATGCAAGAGCGCGACCCAGAGCTATTC 97329
Query 23326 GAGCACGTCTATCGCGGCGTGCCGCTCGGCGACAGCGAGCTTTCGATCTTCAAGCGCCGC 23385
|||||| ||||| ||||||| |||||||| ||||| ||||| || ||||||||||||||
Sbjct 97330 GAGCACATCTATGGCGGCGTTCCGCTCGGTGACAGTGAGCTGTCCATCTTCAAGCGCCGT 97389
Query 23386 TGGCTGGATGCTTGCATTGACGCTGACAAGGTCCTGAAGGTCAGCCTAGCCGGCCGCAAC 23445
||||| ||||| ||| |||| || ||||||| || ||| || | | ||||| ||
Sbjct 97390 TGGCTTGATGCCTGCGTTGATGCGCACAAGGTGCTAAAGATCGAGATGACAGGCCGAAAT 97449
Query 23446 ATCATCGGCTTTGACCCCGCCGACGACGGCGAGGACAATAGCGCGACCGCGGACAAGATC 23505
||||||||||| |||||||||||||| ||||||||||| |||||||| | |||||||||
Sbjct 97450 ATCATCGGCTTCGACCCCGCCGACGATGGCGAGGACAAGAGCGCGACTGTCGACAAGATC 97509
Query 23506 GATGGCGTCTTCGTTGACGCCGAGGACTGGGCATCCGGAAAGGACGAGCTCGTCCAGAAC 23565
||||| || ||| ||||| || |||||| | || || || ||| |||| || || |||
Sbjct 97510 GATGGTGTGTTCACGGACGCTGAAGACTGGTCGTCAGGTAAAGACCAGCTTGTGCAAAAC 97569
Query 23566 GCCAAGAAGGTGTGGGCCAAGGCAAAGCACGCCGGTGCGACCGTCTCCTATGACACGATC 23625
|||||| ||| ||||| |||||||||||||| | || || || || ||||||||||||
Sbjct 97570 GCCAAGCGGGTCTGGGCAAAGGCAAAGCACGCAGACGCAACGGTATCGTATGACACGATC 97629
Query 23626 GGCGTCGGCGCCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAGC 23685
||||| || || ||| || |||
Sbjct 97630 GGCGTGGGTGCATTTGTCGGCGGCTACATTGATGAGCAAAACGAGCAAAACGCCGCGAGC 97689
Query 23686 GTCGAGCATTTCGCATTCCACGCCGGCGGCGCGGTCATGGACCCGGACGAGCCGAGCGAT 23745
|| ||||| ||||||||||| |||||||| || | |||||||| ||||||||||||||
Sbjct 97690 GTGGAGCACTTCGCATTCCATGCCGGCGGTCCGATTATGGACCCAGACGAGCCGAGCGAC 97749
Query 23746 GCGCAGAATGCCAACAGCCCGCTCAACAAGGACGAGTACCTGAACCTGAAGGCGCAGGCC 23805
||| || ||||||||||||||||||| |||| || ||||||||||||||||||||
Sbjct 97750 ACGCTTAACAGCAACAGCCCGCTCAACAAGCACGAATATCTGAACCTGAAGGCGCAGGCA 97809
Query 23806 TGGGCCAATACCGCGCGTCGAGCCATGCTGACATTCAACGCTGTGGCCCGTGGCCACCCG 23865
|||||||| || || || || |||||| |||| ||||| || || || | || || ||
Sbjct 97810 TGGGCCAACACAGCCCGCCGCGCCATGTTGACGTTCAATGCCGTCACCAGAGGGCAGGCG 97869
Query 23866 ATCAAGC-CGGAGGACGTCCTGTCCTTCTCCTCGGCCATGGGCGTCAAGAAGCTGGATGC 23924
|| | || | |||||||| ||||| ||||||||| |||||||| | |||||||||||
Sbjct 97870 AT-ACGCACAGAGGACGTTCTGTCGTTCTCCTCGACCATGGGCAAGGAAAAGCTGGATGC 97928
Query 23925 GCTCTTCACCGAGCTTTGCGTCCCTTGGTGGGTCGAGAGCGAAGGCAAGAAGCGGGTCGT 23984
||||||||| ||||||||||| ||||||||||| |||| |||||||| || || |||||
Sbjct 97929 GCTCTTCACAGAGCTTTGCGTGCCTTGGTGGGTTGAGACGGAAGGCAAAAAACGTGTCGT 97988
Query 23985 GCCGAAACTGAAGCTCAAGAAGGACTTGGGCGTCAAATCTCACAACCTCGCTGACGCGGT 24044
|||||| |||||||||||||||| | ||||||||||| || ||||| |||||||| |
Sbjct 97989 GCCGAAGGTGAAGCTCAAGAAGGATCTTGGCGTCAAATCGCATAACCTGGCTGACGCTCT 98048
Query 24045 GATCGCAGCGGACAACGTCAACATCGCGGCTGGCCCGGCCGTCGCCATGTTCCTGAC--- 24101
||||||||| || ||||| || ||| || || | | ||| || |||||||||||
Sbjct 98049 GATCGCAGCCGATAACGTGAATATC---GCAAGCTCTGGCGTGGCGATGTTCCTGACATC 98105
Query 24102 ----------CAAGAGGCACCGATGAGCAACGTAGTCAGCCTGGTCAACCACGTCCAAAG 24151
||||||||||||||||||| || || | |||| |||| | |
Sbjct 98106 ACGTCACCGATAAGAGGCACCGATGAGCAATGTTGTGATGCTGGCGAACCGAG---CAGT 98162
Query 24152 GCGC---CTTGGCAGC-ATGTTCCCCGGCTTCTTCGCCAACGGGAACACGAAGCACGACC 24207
|||| ||||| ||| ||||||||||||||||| | || || |||||||||||
Sbjct 98163 GCGCCAGCTTGG-AGCGATGTTCCCCGGCTTCTT-----TCCGGGTCA-GAAGCACGACC 98215
Query 24208 ATTACAAGGACTTCGGCTATCCGGAGACCCTGTCTTTCACGCAGGTCTACCGGATGTACT 24267
|| ||||||||||||||||||| || || ||| | ||| | | | ||||| ||||| |
Sbjct 98216 ATAACAAGGACTTCGGCTATCCCGAAACGCTGACATTCGATCTGCTGTACCGCATGTATT 98275
Query 24268 GCCGGAACGGCGTGGCGGCCGCCGGCGTCGATAAGACGATCCGCAAGACCTGGCAGGACA 24327
|||| |||||| | || || || | ||| || ||||| | |||||| ||||||||||
Sbjct 98276 GCCGCAACGGCATCGCTGCGGCAGCCGTAGACAAGACCGCGCTCAAGACTTGGCAGGACA 98335
Query 24328 ATCCGTTCCTCCTTGAAAAGGAGCGCGACGGCTCGCAGGGCAGCCAGGACGACGAAACGA 24387
|| ||||| |||||| ||||||| |||||||| ||| || || | | |||||||
Sbjct 98336 CGCCCTTCCTTCTTGAACAGGAGCGTGACGGCTCACAGAAGGGCAAGAGCAAGGAAACGA 98395
Query 24388 CGCTGGAAAAGGAAATCCGCCAGCGCTTCGACGATCTCCGGCTCTGGGCTCGCCTTGCCG 24447
||| || | ||||||||||| || | | | || || ||||| || ||||
Sbjct 98396 AGCTTGAGAGGGAAATCCGCCTCAAGTTTGCCTCCATGCGTCTGTGGGCCAAGCTGGCCG 98455
Query 24448 AGGCAGACCGTATGTCGATGGTCGGCGCCTATTCCGGCGTCATCCTTCGCATCGCCGACA 24507
| || ||||| | ||||||||| |||| ||||||||||| || |||||| | ||
Sbjct 98456 AAGCTGACCGCAAGTCGATGGTTGGCGGATATTCCGGCGTTATTCTTCGCCTGAAAGATG 98515
Query 24508 GCAAGCGGTTCGATCAGCCCGTCGATCGCGTCAGCGGCGGCCTAGATGCTCTC-GTCGAG 24566
||||| ||||| || || || ||||| || | || |||||||| | ||| |||
Sbjct 98516 GCAAGACCTTCGACCAACCTGTTGATCGGGTTGGTGGTGGCCTAGAAGGCCTCTATCG-C 98574
Query 24567 ATCATCCCGGCTTGGGAGGGGCAGTTGCAGGTTTCGCAGTGGGACACGGACGAGACGTCC 24626
|| ||| | |||| || |||||| | || | | ||| ||||||||| |||||
Sbjct 98575 ATTGACCCTGTATGGGCTGGCCAGTTGAAAGTAGCCGACTGGAACACGGACGCCACGTCT 98634
Query 24627 GAGACCTACGGCCAACCTAAGATGTTTCAGTTCAGCGAGTCCGCCGTCGAGACCAACGTC 24686
|||||||| ||| | || | |||| |||||| |||| | ||| | || ||| |
Sbjct 98635 GAGACCTATGGCGAGCCGACTATGTACGAGTTCAACGAGGCGAACGTAG---CCGACGAC 98691
Query 24687 AA---GCAGCCGCGCAACCTCATCATCCATCCCGATCGAGTGATCGTCTGGTCGAAGGAT 24743
|| | | |||||||||| ||| ||||| || || ||| | ||||||| | |||
Sbjct 98692 AACCCGAACAAGCGCAACCTCCGCATTCATCCTGACCGCGTGCTTATCTGGTCTGAAGAT 98751
Query 24744 GGCACGGTCCACGGCTCGTCGACATTGGAGCCCGGCTACAACTCCCTGATCGACATGGAG 24803
|||||||| ||||| |||| | | ||| || |||||| |||||||||| | |||
Sbjct 98752 GGCACGGTAAACGGCCGGTCGCTTCTTGCGCCGGGTTACAACGACCTGATCGACCTTGAG 98811
Query 24804 AAGGTCCGCGGCGCCGGCGGCGAGGGGTTCTGGAAGAACGCCAAGTCGGCCCCGGTTCTT 24863
||| || || || ||||| |||||||||||||||||||||||| || ||||| ||
Sbjct 98812 AAGATCAAGGGTGCTGGCGGTGAGGGGTTCTGGAAGAACGCCAAGAGCGCACCGGTGCTG 98871
Query 24864 G--AGGTCGATAAGGACGCCAAGATCGACATGATGGCGAAGGCCATGGGCGTGCCGGTCG 24921
| | | || | |||| |||| ||||| ||||| |||||||| ||||
Sbjct 98872 GAAATGCCGGCA--GACGTGCGCATCGCGGAAATGGCCAAGGCGATGGGCGTCACGGTTC 98929
Query 24922 AAGACCTCGCCGACAAGATGAACGAGCAGGTCGCCGA 24958
| ||| |||| |||||||||||||||||||| |||||
Sbjct 98930 AGGACGTCGCTGACAAGATGAACGAGCAGGTGGCCGA 98966
Score = 365 bits (404), Expect = 1e-96
Identities = 735/1080 (68%), Gaps = 48/1080 (4%)
Strand=Plus/Plus
Query 27998 CACAACCGCCATGCCGCGCCAGTACCCGACAGCGAACTATCAGTTCCTGAAGATGGGCGC 28057
||| || || ||||| || | |||||||| || |||||||| |||||||| ||||||||
Sbjct 102001 CACGACTGCGATGCCCCGTCTTTACCCGACCGCCAACTATCAATTCCTGAAAATGGGCGC 102060
Query 28058 GCTCGGCCTCGAAATCCGTGCGGACTTCAACGGCAAGTCCGGCGTCTNNNNNNNNNNNNN 28117
| | || || ||||| || |||||||||||||| || | |||||||
Sbjct 102061 GATGGGTCTGGAAATTCGGGCGGACTTCAACGGTAAAGCTGGCGTCTTCTACAGCACTAA 102120
Query 28118 NNNNNNNNNNNNNNNCCTCGCTCTGAAAAGGGCGGGGCGCTCCATCG-CAAC-------A 28169
||||||| | | ||||||| | |||| |||| |
Sbjct 102121 CACCTGATCATGAG-CCTCGCTTTCGA----GCGGGGC-CGACATCATCAACGGCTGTAA 102174
Query 28170 GGAGACAGATCCTATGAAGATCCGTTTGAAAGCGCCGGCTGGTCTCGACACCACCGGCAT 28229
|||| | || || |||||||| |||||||| ||||||||||||||| | ||||||||||
Sbjct 102175 GGAGGCCGAACCAATGAAGATTCGTTTGAAGGCGCCGGCTGGTCTCAGCTCCACCGGCAT 102234
Query 28230 CTATGGCAAAGACGGCAAGGAAATGCCGGTCGGTACCGAACTTGACCTGGACGACGAGCC 28289
|| |||||||||||| |||||||| ||||| || | || |||| | || |||||
Sbjct 102235 TTACGGCAAAGACGGCGAGGAAATGGAAGTCGGCACGGTCCTAAACCTCAAAGAGGAGCC 102294
Query 28290 CAAGGGCTGGGCCGGCCGTTACGACATCATCTCGGGCGGCGACCGCAAGGGCAAGGAAGT 28349
|| ||||||| ||| || || || ||| || || | ||| ||||| ||||| |
Sbjct 102295 GAAAGGCTGGGTCGGTCGCTATGATATCTTCGACGGTGACGAGGCCAAGGACAAGGGCGG 102354
Query 28350 -GCT--GACCG-GAGCGGC-----TGCTGAAGGCTATGCC---------GTCAAGGACAA 28391
|| ||| | || | | ||| |||| | | || | |||||||||
Sbjct 102355 CGCCAAGACGGCGATTGTCAACCCTGCCGAAGCCAAGGCTCCCTTCCAGGCCAAGGACAA 102414
Query 28392 GGGTGGCGCCTGGTTCGCCATC-ACCAAG--GACGGTGAGGAAGTGACCAAGAGCTTCCG 28448
||| |||| ||||| |||||| | | | ||||| ||||||||| || ||| |||
Sbjct 102415 GGGCGGCGGCTGGTGGGCCATCTATGACGCAGACGGCAAGGAAGTGA--AATCGCT-CCG 102471
Query 28449 CAAAGCGGACGTCGAGGGCTTCGACGAGATGAGCGACGAGGACAAAGCTGCCTTCGTCGA 28508
||| | |||| || |||| ||| || |||||| ||||| || || |||||
Sbjct 102472 CAAGGATGACGCTGAAATCTTCAACGCACTGTCCGACGAAGACAAGGCGGCGCACGTCGC 102531
Query 28509 CTTGCATAAGAAGGACTGAGGTCCCATGGCAGGCTATGGCGACGATTCCACATTCGCAAC 28568
|| |||| ||| | | ||||||||||||||| || || ||| | ||
Sbjct 102532 GACGCTGAAGACGGAGTAACAAGACATGGCAGGCTATGGTGATGACGGTGGGTTCTCCAC 102591
Query 28569 GTGGCTGACCGATAACGGGTACACTTTGCCCGGTACCGCGCCGTCGCCTGCCGTGCTCCG 28628
||||| |||||||||| || | | |||| | ||||| |||||||||| ||||
Sbjct 102592 TTGGCTATCCGATAACGGATATGTTCTCCCCGCTGATGCGCCAGCGCCTGCCGTTATCCG 102651
Query 28629 CAATCGCGGGAGCCAGTACATCGATTCCGTGTATGGCTCCCGTTTCGTTGG-TCGCATCG 28687
||| || |||||||||||||||||| | ||||| ||||| || ||| |||| || |
Sbjct 102652 CAACCGTGGGAGCCAGTACATCGATGCGGTGTACGGCTCTCGGTTCCTTGGGTCTGTTGT 102711
Query 28688 CGGC-CTACGATCAGGAACGCCAGTGGCCGCGCGAAGGCGCTATCGTGAGCGGGAAGTTG 28746
| | | ||| ||||| ||||| |||||||| ||||| |||||||||| || ||| ||
Sbjct 102712 AGACGCCACG--CAGGAGCGCCAATGGCCGCGTGAAGGGGCTATCGTGAATGGCAAGCTG 102769
Query 28747 ATCCCGTCCGATGTCGTGCCAGCGGCGGTCATCAACGCATCATATTTTGCGGCCTACCAG 28806
| |||| |||| ||||| || ||||| ||||| |||||| || || | |||
Sbjct 102770 CTGTCGTCGAATGTGGTGCCGATCGCCGTCATAAACGCCTCATATCAGGCAGCATGGCAG 102829
Query 28807 GAAGCGACGAAGCCCGGCAGCCTGTCTGTCGTCGGCTCTGGCGCTACCCG-CGTGAAGCG 28865
||||||||||| ||||||||||| || |||||||| |||| | || | | |||
Sbjct 102830 GAAGCGACGAACCCCGGCAGCCTCAGCGTGGTCGGCTC-GGCGTCAGGCGCCATTGTGCG 102888
Query 28866 GAAGAAGGTCGGCCAGCTTGAGGTCGAGTACCAGAACGCGTCGGACGACAGCGAGACTGG 28925
| |||||||| |||||| || |||| ||||| | |||| || | |||
Sbjct 102889 TGAAAAGGTCGGATCGCTTGAAGTGCAGTATGCCAACGCCCAGAGCGACGGCACGGCTGT 102948
Query 28926 CTCTGACCTCACCCCCATCATTTCGATCGTCGATGGCATGTTGGCGCCGTTCCTGCGCGA 28985
||| |||| || | ||||| || |||||||| ||| |||||||||||||| ||
Sbjct 102949 CTC---AATCACACCTCTGATTTCCATTGTCGATGGGATGCTGGCGCCGTTCCTGAAGGA 103005
Query 28986 CGACAGCCTCGTATGTGTCGGCCTCATGTCGGTTGGCTGCTG-ATGGCTACGTTCGATTA 29044
||| || | || ||| || ||| || || ||||| ||||| || ||||| ||
Sbjct 103006 CGAGGATCTGCCCTACGTTGGCATCTGGTCTGTGGGGTGCTGAATGGCAACCTTCGACTA 103065
Score = 199 bits (220), Expect = 1e-46
Identities = 263/362 (73%), Gaps = 2/362 (1%)
Strand=Plus/Plus
Query 13778 CTCCTTG-AACGAGACCAGAGATCGCACAGGGACCGAAAAATGTACGGCAAAAGAGTTTC 13836
||||||| |||||| || | |||||||| | ||| |||||||||||||| ||||
Sbjct 88019 CTCCTTGGAACGAGGTCA-ACTTCGCACAGAGGATGAAGGATGTACGGCAAAAGTCTTTC 88077
Query 13837 CAAAACCGGAAAACCTGTTTCCGAGGCGAAGATGACAAGCGCAGCATTGACAGAGGCAAA 13896
| ||| ||||||| |||||||||| |||||| || | || |||| ||||||||
Sbjct 88078 CGAAAACGGAAAAAGAGTTTCCGAGGTTGAGATGAATAGTGTTGCGTTGAACGAGGCAAA 88137
Query 13897 AGGTTGGTACGCAGCCCTTATGGACGCAGAGTTCAAGGGGCGCGGAGATCGTGAAAAATC 13956
||||||| | ||||| ||||| |||| | || ||||| ||||||||||| ||
Sbjct 88138 AGGTTGGGCGGATGCCCTCATGGATAGCGAGTACCGCGGTCGCGGTGATCGTGAAAAGTC 88197
Query 13957 CGTCCGTGGCAGGATCGCGGACGAGACCGGTATTCCGGAAAGCTACCTCTATCGACTTCA 14016
||| || ||| | | | | |||||| ||||||||||||||||||| || || ||
Sbjct 88198 CGTGCGGGGCCGTGTTTCCAAGCGGACCGGCATTCCGGAAAGCTACCTCTTCCGTCTCCA 88257
Query 14017 GTACAAGACACGTGGAATGAAGGACGTGGCCGGGTCAGCGTACCGAGCGCTGATGTTGGC 14076
||||||||| || | ||||| |||||| ||||| || || ||||| ||||||||| | |
Sbjct 88258 GTACAAGACCCGCGAAATGAGGGACGTTGCCGGCTCCGCATACCGGGCGCTGATGCTCTC 88317
Query 14077 CTATGAGGATCTATGCCAGAAAAATGAGGAAGCGGCGGCCAAGCATCGCGCCGAGCGCCT 14136
|| | || || |||| || || || || |||| ||| | |||||| ||| |
Sbjct 88318 TTACAACGAGCTTTGCCGCCTGAACGAAGAGGCCGCGGATCGGCACCACGCCGAACGCAT 88377
Query 14137 GA 14138
||
Sbjct 88378 GA 88379
>seq25291
Length=77000
Score = 354 bits (392), Expect = 3e-93
Identities = 685/1002 (68%), Gaps = 30/1002 (3%)
Strand=Plus/Plus
Query 24270 CGGAACGGCGTGGCGGCCGCCGGCGTCGATAAGACGATCCGCAAGACCTGGCAGGACAAT 24329
|| |||||| | || || |||| ||||| || ||| | ||||| ||||||||||
Sbjct 12001 CGCAACGGCATTGCTGCTGCCGCGGTCGACAAAACGGCGCTGAAGACATGGCAGGACATG 12060
Query 24330 CCGTTCCTCCTTGAAAAGGAGCGCGACGGCTCGCAGGGCAGCCAGGACGACGAAACGACG 24389
|| ||||| || || ||||||||||||| |||||| || || | | ||||||| |
Sbjct 12061 CCTTTCCTGCTGGAGCAGGAGCGCGACGGATCGCAGACAGGCAAGCGCAAGGAAACGAAG 12120
Query 24390 CTGGAAAAGGAAATCCGCC---AG--CGCTTCGACGATCTCCGGCTCTGGGCTCGCCTTG 24444
|| || ||||||||||||| || |||||| | | || || ||||| || |
Sbjct 12121 CTTGAGAAGGAAATCCGCCTCAAGTTCGCTTCCATG-----CGCCTGTGGGCCAAGCTGG 12175
Query 24445 CCGAGGCAGACCGTATGTCGATGGTCGGCGCCTATTCCGGCGTCATCCTTCGCATCGCCG 24504
|||| || ||||| | ||||||||| || | || || ||||||||||| | | |
Sbjct 12176 CCGAAGCCGACCGCAAGTCGATGGTTGGTGGATACTCGGGCGTCATCCTGAGGTTGAAAG 12235
Query 24505 ACAGCAAGCGGTTCGATCAGCCCGTCGATCGCGTCAGCGGCGGCCTAGATGCTCTCGT-- 24562
|||||||| | || || |||| || ||| | || | |||||||| |||| || ||
Sbjct 12236 ACAGCAAGGGCTTTGACGAGCCTGTTGATAGGGTGAATGGCGGCCTTGATGGCCT-GTAC 12294
Query 24563 CGAGATCATCCCGGCTTGGGAGGGGCAGTTGCAGGTTTCGCAGTGGGACACGGACGAGAC 24622
|| | |||| || |||| || |||||| |||| || | |||||||| || |
Sbjct 12295 CGCATTGATCC-GGTATGGGCCGGCCAGTTGAAGGTCGCGGATTGGGACACCGATACCGC 12353
Query 24623 GTCCGAGACCTACGGCCAACCTAAGATGTTTCAGTTCAGCGAGTCCGCCGTCGAGAC--- 24679
|| ||||| ||||| | || | |||| |||||| ||| | |||||||| ||
Sbjct 12354 ATCGGAGACTTACGGTGAGCCCACCATGTACGAGTTCAACGAAGCAGCCGTCGAAACGGG 12413
Query 24680 CAACGTCAAGCAGCCGCGCAACCTCATCATCCATCCCGATCGAGTGATCGTCTGGTCGAA 24739
|||| || | | ||| ||| |||||| || || |||||| | | ||||| |
Sbjct 12414 CAACCCGAACAAAC---GCAGCCTGCGCATCCACCCTGACCGAGTGTTGATATGGTCCGA 12470
Query 24740 GGATGGCACGGTCCACGGCTCGTCGACATTGGAG---CCCGGCTACAACTCCCTGATCGA 24796
||||| || ||| | | || ||||| || || | |||| ||| || ||
Sbjct 12471 AGATGGGACAGTCGAAG---CGAAATCATTGCTCTCTCCTGGATTCAACGACCTAATTGA 12527
Query 24797 CATGGAGAAGGTCCGCGGCGCCGGCGGCGAGGGGTTCTGGAAGAACGCCAAGTCGGCCCC 24856
| | |||||| || ||||||||||||||||| || ||||||||||| ||| |||| ||
Sbjct 12528 CCTTGAGAAGATCAAGGGCGCCGGCGGCGAGGGCTTTTGGAAGAACGCTAAGGCGGCTCC 12587
Query 24857 GGTTCTTGAGGTCGATAAGGACGCCAAGATCGACATGATGGCGAAGGCCATGGGCGTGCC 24916
||| | || |||||||| ||||| |||||||| |||||| ||||||||||| || ||
Sbjct 12588 GGTATTCGAAGTCGATAAAGACGCTAAGATCGAACAGATGGCCAAGGCCATGGGGGTTCC 12647
Query 24917 GGTCGAAGACCTCGCCGACAAGATGAACGAGCAGGTCGCCGATTGGAGCGCTGGCTTCGA 24976
| | || |||| ||| ||||| |||||||||| || | ||||||||
Sbjct 12648 CGCTGGTGAAGTCGCGGACCGCATGAATGAGCAGGTCGAGGACTATCAAAAGGGCTTCGA 12707
Query 24977 TAAGCTGCTCATGATCATGGGCATGGAAGCGAAGACACTGCAGGTTACCCTGCCGTCGCC 25036
||| |||| ||| ||||||| ||| | || || | || || || || ||| ||
Sbjct 12708 CAAGATGCTTATGCTCATGGGTATGCAGGCAAAAAGCCTTAGCGTCACGCTTCCGAGCCC 12767
Query 25037 CGAGCATTTCTACGCCATTGCC-CTGCAGGATTTCGCGGCATCCATGAACATGCCGGTGA 25095
|||||||||| | || ||| |||||| |||||| || || || ||||||| |||
Sbjct 12768 GGAGCATTTCT-GGTCAGCGCCACTGCAGTCTTTCGCCGCCTCTGTGGGCATGCCGCTGA 12826
Query 25096 AGATCCTCGTCGGCATGCAGACTGGCGANNNNNNNNNNNNNGAAGACGCGAGCGAGTGGG 25155
| ||||| || || | ||||| || || |||||| | |||||||
Sbjct 12827 AAATCCTTGTTGGTAACCAGACAGGAGAGCGGGCGTCTACAGAAGACTCCGACGAGTGGA 12886
Query 25156 CGCAGACGAACATGTCGCGCCGCGCCAACCAGACGATTCCGAACGTCATGTCTCTGGTCA 25215
| |||||||||| |||| || ||| || || |||||||||||||| ||||
Sbjct 12887 ACCTGACGAACATGGCGCGGCGACGAAACGTCACCCACCCCAACGTCATGTCTCTTGTCA 12946
Query 25216 ACCGGCTGG-AACAGTTCGGCATCCTGCCTGAGAAGGACTGG 25256
| | ||| ||| | ||||||||||| |||| ||||||
Sbjct 12947 CCAGAATGGTGACA-TGGGGCATCCTGCCGCAGAAAGACTGG 12987
Score = 129 bits (142), Expect = 2e-25
Identities = 328/496 (66%), Gaps = 41/496 (8%)
Strand=Plus/Plus
Query 28222 ACCGGCATCTATGGCAAAGACGGCAAGGAAATGCCGGTCGGTACCGAACTTGACCTGGAC 28281
||||||||||| ||| |||||||||||||||| |||||| | ||| ||| |
Sbjct 16001 ACCGGCATCTACGGCGCAGACGGCAAGGAAATGGAGGTCGGCCATGTACTGACCCTCAAG 16060
Query 28282 GACGAGCCCAAGGGCTGGGCCGGCCGTTACGACATCATCTCGGGCG---------GCGAC 28332
|| ||||| |||||||||||||| || ||||||||| || |||| ||||
Sbjct 16061 GAGGAGCCGAAGGGCTGGGCCGGTCGCTACGACATCCTCGACGGCGACAGCGCCGGCGAA 16120
Query 28333 CGCAAGGGCAAGGA--AGTGCTGACCGGAG-CGGCTG------------CTGAAGGCTAT 28377
||||| |||||| || || | | || |||| | |||||| | |
Sbjct 16121 GACAAGGCCAAGGACAAGGGCGGCGCCAAGACGGCCGTCATCAACCCCGCTGAAGCCAAG 16180
Query 28378 GCC---------GTCAAGGACAAGGGTGGCGCCTGGTTCGCCATC-ACCAAG--GACGGT 28425
||| | |||||||||||| |||| ||||| |||||| | | | |||||
Sbjct 16181 GCCCCATTCCAGGCCAAGGACAAGGGCGGCGGCTGGTGGGCCATCTATGACGCTGACGGC 16240
Query 28426 GAGGAAGTGACCAAGAGCTTCCGCAAAGCGGACGTCGAGGGCTTCGACGAGATGAGCGAC 28485
||||||||| || ||||||| | |||| || |||| | | || ||
Sbjct 16241 AAGGAAGTGA---AGTCGCTCCGCAAGGATGACGCGGAAATCTTCAATGCCCTGTCGGAT 16297
Query 28486 GAGGACAAAGCTGCCTTCGTCGACTTGCATAAGAAGGACTGAGGTCCCATGGCAGGCTAT 28545
|| ||||| || || ||||| | ||| ||| | | | |||||||||||||
Sbjct 16298 GAAGACAAGGCCGCGCACGTCGCAACCCTGAAGGCGGAGTAACGAGACATGGCAGGCTAT 16357
Query 28546 GGCGACGATTCCACATTCGCAACGTGGCTGACCGATAACGGGTACACTTTGCCCGGTACC 28605
|| || ||| | ||| | | |||||| |||||||||| ||||| ||||||| |
Sbjct 16358 GGTGATGATGCGGGGTTCTCCGCTTGGCTGGCCGATAACGGCTACACCTTGCCCGCTGAA 16417
Query 28606 GCGCCGTCGCCTGCCGTGCTCCGCAATCGCGGGAGCCAGT-ACATCGATTCCGTGTATGG 28664
||||| ||||||||| |||||||| || || |||| | || ||| || |||| ||
Sbjct 16418 GCGCCAGAGCCTGCCGTTCTCCGCAACCG-TGGCGCCAATGTGATTGATGCCTTGTACGG 16476
Query 28665 CTCCCGTTTCGTTGGT 28680
|||||| || |||
Sbjct 16477 GAGCCGTTTTGTCGGT 16492
Score = 86.0 bits (94), Expect = 2e-12
Identities = 284/435 (65%), Gaps = 14/435 (3%)
Strand=Plus/Plus
Query 13729 CAACTGCGCCGTCCTCTCCATCGGAAGTAATGCCTGTGCGCATCAACGTCTCCTTGAACG 13788
|| ||| |||| | |||||||| | || |||| || |||| | |||| | |||
Sbjct 766 CATCTGTGCCGCCGTCTCCATCAGTTTCAAAGCCTTTGTGCATGTTGGCCTCCGTTGACG 825
Query 13789 AGACCAGAGATCGCACAGGGACCGAAAAATGTACGGCAAAAGAGTTTCCAAAACCGGAAA 13848
||| | ||||||| | ||| ||||| | ||| || |||| || || |||
Sbjct 826 CCGCCA-ACCTCGCACAAAGGATGAAGAATGTCTGACAATAGGTTTTCACGAAACGTAAA 884
Query 13849 ACCTGTTTCCGAGGCGAAGATGACAAGCGCAGCATTGACAGAGGCAAAAGGTTGGTACGC 13908
|||||| |||| | ||| | || | || || || |||| || |||||||
Sbjct 885 TTTTGTTTCAGAGGATGAAATGTCTAGTACTGCGTTAGTCGAAGCAAGAGACTGGTACGA 944
Query 13909 AGCCCTTATGGACGCAGAGTTCAAGGGGCGCGGAGATCGTGAAAAATCCGTCCGTGGCAG 13968
||||||| | || || | ||| || || ||||||||||| || | |||||| |
Sbjct 945 CAAGCTTATGGCCTTGGAATTTAGGGGCCGTGGCGATCGTGAAAAGTCTGCCCGTGGACG 1004
Query 13969 GATCGCGGACGAGACCGGTATTCCGGAAAGCTACCTCTATCGA-CTTCAGTACAAGACAC 14027
| || || | | |||| | || || | | || | |||| ||||| |||||| |
Sbjct 1005 AGTAGCCGATAACATCGGTGTCCCTGAGACGTGGCTGT-TCGACCTTCAATACAAGTCCA 1063
Query 14028 GTGGAATGAAGGACGTGGCCGGGTCAGCGTACCGAGCGCTGATG-TTGGC--------CT 14078
|||| | ||| || ||| ||| | || ||||| || ||| ||||| |
Sbjct 1064 GTGGCAAGAAAGATGTGCGCGGTGCGCTCTATCGAGCCCTCATGCTTGGCATCCAGAAAT 1123
Query 14079 ATGAGGATCTATGCCAGAAAAATGAGGAAGCGGCGGCCAAGCATCGCGCCGAGCGCCTGA 14138
| || || || ||||||||||| ||||||||||||| | | ||||| |||||||
Sbjct 1124 ACGAAGACCTTTGCCAGAAAAACGAGGAAGCGGCGGATCGGTACAAGGCCGATCGCCTGA 1183
Query 14139 AACTGAGGAAGGCAA 14153
||| || | ||||||
Sbjct 1184 AAC-GACG-AGGCAA 1196
>seq17619
Length=248000
Score = 82.4 bits (90), Expect = 2e-11
Identities = 128/180 (71%), Gaps = 11/180 (6%)
Strand=Plus/Minus
Query 3322 TTGGTCTCGCGGTGTTCGCCGCCGAGGATCAACGC---AACCTTATGGTCGAGATCCCAT 3378
||| | |||||||| | ||| |||||||| | || ||| ||| || || |||||
Sbjct 63723 TTGCTTTCGCGGTGCTGGCCCCCGAGGATGAGAGCGTGAAC---ATGCTCAAGCTCCCAG 63667
Query 3379 TCATCGCGCACCGGGTCGATCTTCTCG-CCGGTCAGGTGGCAGATGCCGCCCTCGCGGTC 3437
||| | || || || || || ||||||||||||||||||||| | |||||
Sbjct 63666 ----CGCTCGCCAGGCTGAATTTTACGTCCGGTCAGGTGGCAGATGCCGTTATGCCGGTC 63611
Query 3438 GAAGACGCGCATGCGGACGCGATCGGGGACTTTCTGGTCGTCGGTCTTGCCGATCCATTC 3497
||| |||||| ||||| || || ||||| ||| ||||||||||| ||||||||
Sbjct 63610 GAACACGCGCTGTCGGACCCGTGGCGGCACTTTGGCGTCATCGGTCTTGCCAATCCATTC 63551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162375573791760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |