Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq57075 2085 0.0 seq25291 354 3e-93 seq17619 82.4 2e-11 >seq57075 Length=390000 Score = 2085 bits (2312), Expect = 0.0 Identities = 2218/2917 (76%), Gaps = 55/2917 (2%) Strand=Plus/Plus Query 22073 CCTCCAAGGTACCCCATGCCCGTCCTAAAGAACGCGCGGCACGAGAAGTTCGCGCAAGCG 22132 || ||||||| |||||||| || || ||||| || |||||||||| |||||||||| | Sbjct 96074 CCCCCAAGGTTACCCATGCCAGTACTCAAGAATGCACGGCACGAGACTTTCGCGCAAGGG 96133 Query 22133 TTGTCCAAAGGCAAGACAGCAGATGACGCATATGCAGA-GGCAGGGTTCAAACCCGACCG 22191 ||| | || || | |||||| ||||| || || |||| ||| |||||||| || || | Sbjct 96134 TTGGCAAAGGGGATGACAGCGGATGAAGCGTAC-CAGAAGGCGGGGTTCAAGCCTGATAG 96192 Query 22192 TGGCAATGCTTCGCGCTTACAGCAGAAAGACAACATCAGACAACGCGTCGCCGAGCTTTT 22251 ||||| || ||||| |||||||||| |||| ||| |||||||||| | ||| |||| Sbjct 96193 GGGCAACGCATCGCGTCTACAGCAGAATGACAGCATTCGACAACGCGTGTCTGAGTTTTT 96252 Query 22252 GGAATGGGAGCAGACGGTGGAGCGCAAAGCCACCGAGAAGGCCATAGACAAGCTCGCCAT 22311 |||||||||||| || || || |||| ||||| ||||||||| |||| ||||| || || Sbjct 96253 GGAATGGGAGCAAACAGTCGAACGCAGGGCCACAGAGAAGGCCGTAGAGAAGCTTGCTAT 96312 Query 22312 CACGAAAGAGCGCGTCCTGGCAGAGCTCGCCAAGATCGGGTTCGCCGATATCCGCAAGGC 22371 ||| || ||||| || |||||||||| ||||||||||| ||||| || ||||| ||||| Sbjct 96313 CACCAAGGAGCGGGTATTGGCAGAGCTTGCCAAGATCGGCTTCGCGGACATCCGTAAGGC 96372 Query 22372 GATCAAATGGCAGGGCACGCTGGTGACCGAGGAAGACAACCCGGAAGGCGGTGATGTCCT 22431 |||| |||||| || |||||||| ||||| || || ||||| || ||||| || || || Sbjct 96373 TATCAGATGGCAAGGGACGCTGGTCACCGAAGAGGATAACCCCGATGGCGGCGACGTGCT 96432 Query 22432 CGTGATCAAGAACGTCGTCACGAACAACGTCCAGCTGATTTCCAGCGATGAGATCGACGA 22491 || |||||||| || || || |||||||||||||| ||||| || || ||||| ||||| Sbjct 96433 GGTCATCAAGAATGTGGTGACCAACAACGTCCAGCTCATTTCGAGTGACGAGATAGACGA 96492 Query 22492 CGACACAGCTGCAGCCATTTCCGAGATCAGCCAGAATTCGACGGGCGGCATCAAGGTCAA 22551 |||||| || | ||||| | ||| |||||||||| ||||||||||||||||| |||| Sbjct 96493 CGACACGGCCGGTGCCATAGCTGAGGTCAGCCAGAACGCGACGGGCGGCATCAAGATCAA 96552 Query 22552 GTTCCACGACAAGAAGGGCGCGCTCGTGGATATCGGGAAGCACCTTGGCATGTTCGTCGA 22611 | | ||||| ||||||| ||| || || |||||||| |||||||| ||||||||||| || Sbjct 96553 GCTTCACGATAAGAAGGCCGCACTGGTCGATATCGGCAAGCACCTGGGCATGTTCGTTGA 96612 Query 22612 GCGACACGAGCACTCCGGACCTGACGGCGCCCCGATACAGACCGAGACAAGAACATGGCG 22671 ||| || ||||| ||||| || || || | ||| |||||||| ||||| || |||||||| Sbjct 96613 GCGCCATGAGCATTCCGGCCCAGATGGTGGCCCCATACAGACAGAGACGAGGACATGGCG 96672 Query 22672 GGAAGTGCTGCGC--AGCGAA-AAGAGCTAGACGCCACCACCCATCTTACCAACCCTGCG 22728 || || ||||| || || ||| || |||| || || || |||||||| || Sbjct 96673 AGAGGTTCTGCGGCAAGAGACGAAGGACTGATCGCCGCCGCCACGCTGACCAACCCCGCA 96732 Query 22729 CTTCACGAGTTTTGGGAACAGGTCTTCCTCGGGCAGGCAGACATCGCGGTTCTCCACGGT 22788 || || || |||||| |||||||| ||||| || ||||| || || | ||||| Sbjct 96733 CTCTTTGACTTCTGGGAAAAGGTCTTCTTCGGGGAGAATGACATTGCCGTCTTGCACGGC 96792 Query 22789 GGGCGCTCAAGCTCAAAGACGCGAGACACCGCGTGCCAGCTGGTGCGCCTGGTCGACCAC 22848 || ||||| || || |||||| ||||||| || ||||| ||||| ||||||||||| || Sbjct 96793 GGCCGCTCCAGTTCGAAGACGAGAGACACAGCCTGCCAACTGGTTCGCCTGGTCGAGCAT 96852 Query 22849 GTCGGCGTCAAGATGCGGGTTCTCTGCATCCGTCGCTTCCAAAACCGCATTCAGGACTCG 22908 ||| ||||||||||||| || | |||||||| || || || |||||||||||||| ||| Sbjct 96853 GTCCGCGTCAAGATGCGCATTATGTGCATCCGGCGTTTTCAGAACCGCATTCAGGAATCG 96912 Query 22909 GTCTATACCGAACTGAAGTGGGCGATCGCTCATCTCGGGCT-GAGCAAAGCCTTCGACGT 22967 || || ||||||||||| ||||| |||| |||||||||||| ||| | |||||||| || Sbjct 96913 GTATACACCGAACTGAAATGGGCTATCGGTCATCTCGGGCTACAGC-ATGCCTTCGATGT 96971 Query 22968 CCAGAAGACGACGATCATT--CATCGCAGGACCGGCGCGGAGTTCATCTTCTACGGCATC 23025 |||||||||||| |||||| |||||| |||||||||||||||||| |||||||| ||| Sbjct 96972 CCAGAAGACGACCATCATTCACATCGC--GACCGGCGCGGAGTTCATATTCTACGGGATC 97029 Query 23026 GAGCGGAACCTTGAGGACATCAAGGGCACGTCCGACGTCGACATCCTGTGGGTGGAAGAA 23085 ||||| ||||||||||| ||||||||||||||||| ||||||| || ||||| ||||| Sbjct 97030 GAGCGCAACCTTGAGGAAATCAAGGGCACGTCCGATATCGACATTCTCTGGGTTGAAGAG 97089 Query 23086 GCCGAGAAGCTGACCGAGGAGCAATGGACGGTCATCGGCCCGACCATCCGCAAGGAAGAC 23145 || |||||||| || | || || ||| | ||||| | || || ||||| ||||||||| Sbjct 97090 GCGGAGAAGCTAACTGCAGATCAGTGGGCCGTCATTGCGCCAACAATCCGTAAGGAAGAC 97149 Query 23146 AGCCTGGCGATCCTGCTCTTCAACCCGAAGCTGGTCACCGACTACGTCTGGAAGAACTTC 23205 ||||| ||||||||||| |||||||||||| ||||||| || |||||||||||||||||| Sbjct 97150 AGCCTTGCGATCCTGCTGTTCAACCCGAAGATGGTCACGGATTACGTCTGGAAGAACTTC 97209 Query 23206 GTCGTCAACACGCCGCCGCACTGCGTCGTCAAACAGATCAACTACACCTCGAACCCGTTC 23265 || ||||| |||| || ||||| || || | ||||| |||| ||| |||||||||| Sbjct 97210 GTAATCAACCCGCCACCACACTGTGTGGTGCATAAGATCGACTATACCGAGAACCCGTTC 97269 Query 23266 CTATCCTCCAAGGCGCTGCGCGATATCGCGGCGATGCAGGAACGTGACCCGGAGTTGTTC 23325 || || || || |||||||||||| |||||||| || || ||||| ||| | ||| Sbjct 97270 CTTTCAGAGAAAGCCAAGCGCGATATCGCAGCGATGCAAGAGCGCGACCCAGAGCTATTC 97329 Query 23326 GAGCACGTCTATCGCGGCGTGCCGCTCGGCGACAGCGAGCTTTCGATCTTCAAGCGCCGC 23385 |||||| ||||| ||||||| |||||||| ||||| ||||| || |||||||||||||| Sbjct 97330 GAGCACATCTATGGCGGCGTTCCGCTCGGTGACAGTGAGCTGTCCATCTTCAAGCGCCGT 97389 Query 23386 TGGCTGGATGCTTGCATTGACGCTGACAAGGTCCTGAAGGTCAGCCTAGCCGGCCGCAAC 23445 ||||| ||||| ||| |||| || ||||||| || ||| || | | ||||| || Sbjct 97390 TGGCTTGATGCCTGCGTTGATGCGCACAAGGTGCTAAAGATCGAGATGACAGGCCGAAAT 97449 Query 23446 ATCATCGGCTTTGACCCCGCCGACGACGGCGAGGACAATAGCGCGACCGCGGACAAGATC 23505 ||||||||||| |||||||||||||| ||||||||||| |||||||| | ||||||||| Sbjct 97450 ATCATCGGCTTCGACCCCGCCGACGATGGCGAGGACAAGAGCGCGACTGTCGACAAGATC 97509 Query 23506 GATGGCGTCTTCGTTGACGCCGAGGACTGGGCATCCGGAAAGGACGAGCTCGTCCAGAAC 23565 ||||| || ||| ||||| || |||||| | || || || ||| |||| || || ||| Sbjct 97510 GATGGTGTGTTCACGGACGCTGAAGACTGGTCGTCAGGTAAAGACCAGCTTGTGCAAAAC 97569 Query 23566 GCCAAGAAGGTGTGGGCCAAGGCAAAGCACGCCGGTGCGACCGTCTCCTATGACACGATC 23625 |||||| ||| ||||| |||||||||||||| | || || || || |||||||||||| Sbjct 97570 GCCAAGCGGGTCTGGGCAAAGGCAAAGCACGCAGACGCAACGGTATCGTATGACACGATC 97629 Query 23626 GGCGTCGGCGCCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAGC 23685 ||||| || || ||| || ||| Sbjct 97630 GGCGTGGGTGCATTTGTCGGCGGCTACATTGATGAGCAAAACGAGCAAAACGCCGCGAGC 97689 Query 23686 GTCGAGCATTTCGCATTCCACGCCGGCGGCGCGGTCATGGACCCGGACGAGCCGAGCGAT 23745 || ||||| ||||||||||| |||||||| || | |||||||| |||||||||||||| Sbjct 97690 GTGGAGCACTTCGCATTCCATGCCGGCGGTCCGATTATGGACCCAGACGAGCCGAGCGAC 97749 Query 23746 GCGCAGAATGCCAACAGCCCGCTCAACAAGGACGAGTACCTGAACCTGAAGGCGCAGGCC 23805 ||| || ||||||||||||||||||| |||| || |||||||||||||||||||| Sbjct 97750 ACGCTTAACAGCAACAGCCCGCTCAACAAGCACGAATATCTGAACCTGAAGGCGCAGGCA 97809 Query 23806 TGGGCCAATACCGCGCGTCGAGCCATGCTGACATTCAACGCTGTGGCCCGTGGCCACCCG 23865 |||||||| || || || || |||||| |||| ||||| || || || | || || || Sbjct 97810 TGGGCCAACACAGCCCGCCGCGCCATGTTGACGTTCAATGCCGTCACCAGAGGGCAGGCG 97869 Query 23866 ATCAAGC-CGGAGGACGTCCTGTCCTTCTCCTCGGCCATGGGCGTCAAGAAGCTGGATGC 23924 || | || | |||||||| ||||| ||||||||| |||||||| | ||||||||||| Sbjct 97870 AT-ACGCACAGAGGACGTTCTGTCGTTCTCCTCGACCATGGGCAAGGAAAAGCTGGATGC 97928 Query 23925 GCTCTTCACCGAGCTTTGCGTCCCTTGGTGGGTCGAGAGCGAAGGCAAGAAGCGGGTCGT 23984 ||||||||| ||||||||||| ||||||||||| |||| |||||||| || || ||||| Sbjct 97929 GCTCTTCACAGAGCTTTGCGTGCCTTGGTGGGTTGAGACGGAAGGCAAAAAACGTGTCGT 97988 Query 23985 GCCGAAACTGAAGCTCAAGAAGGACTTGGGCGTCAAATCTCACAACCTCGCTGACGCGGT 24044 |||||| |||||||||||||||| | ||||||||||| || ||||| |||||||| | Sbjct 97989 GCCGAAGGTGAAGCTCAAGAAGGATCTTGGCGTCAAATCGCATAACCTGGCTGACGCTCT 98048 Query 24045 GATCGCAGCGGACAACGTCAACATCGCGGCTGGCCCGGCCGTCGCCATGTTCCTGAC--- 24101 ||||||||| || ||||| || ||| || || | | ||| || ||||||||||| Sbjct 98049 GATCGCAGCCGATAACGTGAATATC---GCAAGCTCTGGCGTGGCGATGTTCCTGACATC 98105 Query 24102 ----------CAAGAGGCACCGATGAGCAACGTAGTCAGCCTGGTCAACCACGTCCAAAG 24151 ||||||||||||||||||| || || | |||| |||| | | Sbjct 98106 ACGTCACCGATAAGAGGCACCGATGAGCAATGTTGTGATGCTGGCGAACCGAG---CAGT 98162 Query 24152 GCGC---CTTGGCAGC-ATGTTCCCCGGCTTCTTCGCCAACGGGAACACGAAGCACGACC 24207 |||| ||||| ||| ||||||||||||||||| | || || ||||||||||| Sbjct 98163 GCGCCAGCTTGG-AGCGATGTTCCCCGGCTTCTT-----TCCGGGTCA-GAAGCACGACC 98215 Query 24208 ATTACAAGGACTTCGGCTATCCGGAGACCCTGTCTTTCACGCAGGTCTACCGGATGTACT 24267 || ||||||||||||||||||| || || ||| | ||| | | | ||||| ||||| | Sbjct 98216 ATAACAAGGACTTCGGCTATCCCGAAACGCTGACATTCGATCTGCTGTACCGCATGTATT 98275 Query 24268 GCCGGAACGGCGTGGCGGCCGCCGGCGTCGATAAGACGATCCGCAAGACCTGGCAGGACA 24327 |||| |||||| | || || || | ||| || ||||| | |||||| |||||||||| Sbjct 98276 GCCGCAACGGCATCGCTGCGGCAGCCGTAGACAAGACCGCGCTCAAGACTTGGCAGGACA 98335 Query 24328 ATCCGTTCCTCCTTGAAAAGGAGCGCGACGGCTCGCAGGGCAGCCAGGACGACGAAACGA 24387 || ||||| |||||| ||||||| |||||||| ||| || || | | ||||||| Sbjct 98336 CGCCCTTCCTTCTTGAACAGGAGCGTGACGGCTCACAGAAGGGCAAGAGCAAGGAAACGA 98395 Query 24388 CGCTGGAAAAGGAAATCCGCCAGCGCTTCGACGATCTCCGGCTCTGGGCTCGCCTTGCCG 24447 ||| || | ||||||||||| || | | | || || ||||| || |||| Sbjct 98396 AGCTTGAGAGGGAAATCCGCCTCAAGTTTGCCTCCATGCGTCTGTGGGCCAAGCTGGCCG 98455 Query 24448 AGGCAGACCGTATGTCGATGGTCGGCGCCTATTCCGGCGTCATCCTTCGCATCGCCGACA 24507 | || ||||| | ||||||||| |||| ||||||||||| || |||||| | || Sbjct 98456 AAGCTGACCGCAAGTCGATGGTTGGCGGATATTCCGGCGTTATTCTTCGCCTGAAAGATG 98515 Query 24508 GCAAGCGGTTCGATCAGCCCGTCGATCGCGTCAGCGGCGGCCTAGATGCTCTC-GTCGAG 24566 ||||| ||||| || || || ||||| || | || |||||||| | ||| ||| Sbjct 98516 GCAAGACCTTCGACCAACCTGTTGATCGGGTTGGTGGTGGCCTAGAAGGCCTCTATCG-C 98574 Query 24567 ATCATCCCGGCTTGGGAGGGGCAGTTGCAGGTTTCGCAGTGGGACACGGACGAGACGTCC 24626 || ||| | |||| || |||||| | || | | ||| ||||||||| ||||| Sbjct 98575 ATTGACCCTGTATGGGCTGGCCAGTTGAAAGTAGCCGACTGGAACACGGACGCCACGTCT 98634 Query 24627 GAGACCTACGGCCAACCTAAGATGTTTCAGTTCAGCGAGTCCGCCGTCGAGACCAACGTC 24686 |||||||| ||| | || | |||| |||||| |||| | ||| | || ||| | Sbjct 98635 GAGACCTATGGCGAGCCGACTATGTACGAGTTCAACGAGGCGAACGTAG---CCGACGAC 98691 Query 24687 AA---GCAGCCGCGCAACCTCATCATCCATCCCGATCGAGTGATCGTCTGGTCGAAGGAT 24743 || | | |||||||||| ||| ||||| || || ||| | ||||||| | ||| Sbjct 98692 AACCCGAACAAGCGCAACCTCCGCATTCATCCTGACCGCGTGCTTATCTGGTCTGAAGAT 98751 Query 24744 GGCACGGTCCACGGCTCGTCGACATTGGAGCCCGGCTACAACTCCCTGATCGACATGGAG 24803 |||||||| ||||| |||| | | ||| || |||||| |||||||||| | ||| Sbjct 98752 GGCACGGTAAACGGCCGGTCGCTTCTTGCGCCGGGTTACAACGACCTGATCGACCTTGAG 98811 Query 24804 AAGGTCCGCGGCGCCGGCGGCGAGGGGTTCTGGAAGAACGCCAAGTCGGCCCCGGTTCTT 24863 ||| || || || ||||| |||||||||||||||||||||||| || ||||| || Sbjct 98812 AAGATCAAGGGTGCTGGCGGTGAGGGGTTCTGGAAGAACGCCAAGAGCGCACCGGTGCTG 98871 Query 24864 G--AGGTCGATAAGGACGCCAAGATCGACATGATGGCGAAGGCCATGGGCGTGCCGGTCG 24921 | | | || | |||| |||| ||||| ||||| |||||||| |||| Sbjct 98872 GAAATGCCGGCA--GACGTGCGCATCGCGGAAATGGCCAAGGCGATGGGCGTCACGGTTC 98929 Query 24922 AAGACCTCGCCGACAAGATGAACGAGCAGGTCGCCGA 24958 | ||| |||| |||||||||||||||||||| ||||| Sbjct 98930 AGGACGTCGCTGACAAGATGAACGAGCAGGTGGCCGA 98966 Score = 365 bits (404), Expect = 1e-96 Identities = 735/1080 (68%), Gaps = 48/1080 (4%) Strand=Plus/Plus Query 27998 CACAACCGCCATGCCGCGCCAGTACCCGACAGCGAACTATCAGTTCCTGAAGATGGGCGC 28057 ||| || || ||||| || | |||||||| || |||||||| |||||||| |||||||| Sbjct 102001 CACGACTGCGATGCCCCGTCTTTACCCGACCGCCAACTATCAATTCCTGAAAATGGGCGC 102060 Query 28058 GCTCGGCCTCGAAATCCGTGCGGACTTCAACGGCAAGTCCGGCGTCTNNNNNNNNNNNNN 28117 | | || || ||||| || |||||||||||||| || | ||||||| Sbjct 102061 GATGGGTCTGGAAATTCGGGCGGACTTCAACGGTAAAGCTGGCGTCTTCTACAGCACTAA 102120 Query 28118 NNNNNNNNNNNNNNNCCTCGCTCTGAAAAGGGCGGGGCGCTCCATCG-CAAC-------A 28169 ||||||| | | ||||||| | |||| |||| | Sbjct 102121 CACCTGATCATGAG-CCTCGCTTTCGA----GCGGGGC-CGACATCATCAACGGCTGTAA 102174 Query 28170 GGAGACAGATCCTATGAAGATCCGTTTGAAAGCGCCGGCTGGTCTCGACACCACCGGCAT 28229 |||| | || || |||||||| |||||||| ||||||||||||||| | |||||||||| Sbjct 102175 GGAGGCCGAACCAATGAAGATTCGTTTGAAGGCGCCGGCTGGTCTCAGCTCCACCGGCAT 102234 Query 28230 CTATGGCAAAGACGGCAAGGAAATGCCGGTCGGTACCGAACTTGACCTGGACGACGAGCC 28289 || |||||||||||| |||||||| ||||| || | || |||| | || ||||| Sbjct 102235 TTACGGCAAAGACGGCGAGGAAATGGAAGTCGGCACGGTCCTAAACCTCAAAGAGGAGCC 102294 Query 28290 CAAGGGCTGGGCCGGCCGTTACGACATCATCTCGGGCGGCGACCGCAAGGGCAAGGAAGT 28349 || ||||||| ||| || || || ||| || || | ||| ||||| ||||| | Sbjct 102295 GAAAGGCTGGGTCGGTCGCTATGATATCTTCGACGGTGACGAGGCCAAGGACAAGGGCGG 102354 Query 28350 -GCT--GACCG-GAGCGGC-----TGCTGAAGGCTATGCC---------GTCAAGGACAA 28391 || ||| | || | | ||| |||| | | || | ||||||||| Sbjct 102355 CGCCAAGACGGCGATTGTCAACCCTGCCGAAGCCAAGGCTCCCTTCCAGGCCAAGGACAA 102414 Query 28392 GGGTGGCGCCTGGTTCGCCATC-ACCAAG--GACGGTGAGGAAGTGACCAAGAGCTTCCG 28448 ||| |||| ||||| |||||| | | | ||||| ||||||||| || ||| ||| Sbjct 102415 GGGCGGCGGCTGGTGGGCCATCTATGACGCAGACGGCAAGGAAGTGA--AATCGCT-CCG 102471 Query 28449 CAAAGCGGACGTCGAGGGCTTCGACGAGATGAGCGACGAGGACAAAGCTGCCTTCGTCGA 28508 ||| | |||| || |||| ||| || |||||| ||||| || || ||||| Sbjct 102472 CAAGGATGACGCTGAAATCTTCAACGCACTGTCCGACGAAGACAAGGCGGCGCACGTCGC 102531 Query 28509 CTTGCATAAGAAGGACTGAGGTCCCATGGCAGGCTATGGCGACGATTCCACATTCGCAAC 28568 || |||| ||| | | ||||||||||||||| || || ||| | || Sbjct 102532 GACGCTGAAGACGGAGTAACAAGACATGGCAGGCTATGGTGATGACGGTGGGTTCTCCAC 102591 Query 28569 GTGGCTGACCGATAACGGGTACACTTTGCCCGGTACCGCGCCGTCGCCTGCCGTGCTCCG 28628 ||||| |||||||||| || | | |||| | ||||| |||||||||| |||| Sbjct 102592 TTGGCTATCCGATAACGGATATGTTCTCCCCGCTGATGCGCCAGCGCCTGCCGTTATCCG 102651 Query 28629 CAATCGCGGGAGCCAGTACATCGATTCCGTGTATGGCTCCCGTTTCGTTGG-TCGCATCG 28687 ||| || |||||||||||||||||| | ||||| ||||| || ||| |||| || | Sbjct 102652 CAACCGTGGGAGCCAGTACATCGATGCGGTGTACGGCTCTCGGTTCCTTGGGTCTGTTGT 102711 Query 28688 CGGC-CTACGATCAGGAACGCCAGTGGCCGCGCGAAGGCGCTATCGTGAGCGGGAAGTTG 28746 | | | ||| ||||| ||||| |||||||| ||||| |||||||||| || ||| || Sbjct 102712 AGACGCCACG--CAGGAGCGCCAATGGCCGCGTGAAGGGGCTATCGTGAATGGCAAGCTG 102769 Query 28747 ATCCCGTCCGATGTCGTGCCAGCGGCGGTCATCAACGCATCATATTTTGCGGCCTACCAG 28806 | |||| |||| ||||| || ||||| ||||| |||||| || || | ||| Sbjct 102770 CTGTCGTCGAATGTGGTGCCGATCGCCGTCATAAACGCCTCATATCAGGCAGCATGGCAG 102829 Query 28807 GAAGCGACGAAGCCCGGCAGCCTGTCTGTCGTCGGCTCTGGCGCTACCCG-CGTGAAGCG 28865 ||||||||||| ||||||||||| || |||||||| |||| | || | | ||| Sbjct 102830 GAAGCGACGAACCCCGGCAGCCTCAGCGTGGTCGGCTC-GGCGTCAGGCGCCATTGTGCG 102888 Query 28866 GAAGAAGGTCGGCCAGCTTGAGGTCGAGTACCAGAACGCGTCGGACGACAGCGAGACTGG 28925 | |||||||| |||||| || |||| ||||| | |||| || | ||| Sbjct 102889 TGAAAAGGTCGGATCGCTTGAAGTGCAGTATGCCAACGCCCAGAGCGACGGCACGGCTGT 102948 Query 28926 CTCTGACCTCACCCCCATCATTTCGATCGTCGATGGCATGTTGGCGCCGTTCCTGCGCGA 28985 ||| |||| || | ||||| || |||||||| ||| |||||||||||||| || Sbjct 102949 CTC---AATCACACCTCTGATTTCCATTGTCGATGGGATGCTGGCGCCGTTCCTGAAGGA 103005 Query 28986 CGACAGCCTCGTATGTGTCGGCCTCATGTCGGTTGGCTGCTG-ATGGCTACGTTCGATTA 29044 ||| || | || ||| || ||| || || ||||| ||||| || ||||| || Sbjct 103006 CGAGGATCTGCCCTACGTTGGCATCTGGTCTGTGGGGTGCTGAATGGCAACCTTCGACTA 103065 Score = 199 bits (220), Expect = 1e-46 Identities = 263/362 (73%), Gaps = 2/362 (1%) Strand=Plus/Plus Query 13778 CTCCTTG-AACGAGACCAGAGATCGCACAGGGACCGAAAAATGTACGGCAAAAGAGTTTC 13836 ||||||| |||||| || | |||||||| | ||| |||||||||||||| |||| Sbjct 88019 CTCCTTGGAACGAGGTCA-ACTTCGCACAGAGGATGAAGGATGTACGGCAAAAGTCTTTC 88077 Query 13837 CAAAACCGGAAAACCTGTTTCCGAGGCGAAGATGACAAGCGCAGCATTGACAGAGGCAAA 13896 | ||| ||||||| |||||||||| |||||| || | || |||| |||||||| Sbjct 88078 CGAAAACGGAAAAAGAGTTTCCGAGGTTGAGATGAATAGTGTTGCGTTGAACGAGGCAAA 88137 Query 13897 AGGTTGGTACGCAGCCCTTATGGACGCAGAGTTCAAGGGGCGCGGAGATCGTGAAAAATC 13956 ||||||| | ||||| ||||| |||| | || ||||| ||||||||||| || Sbjct 88138 AGGTTGGGCGGATGCCCTCATGGATAGCGAGTACCGCGGTCGCGGTGATCGTGAAAAGTC 88197 Query 13957 CGTCCGTGGCAGGATCGCGGACGAGACCGGTATTCCGGAAAGCTACCTCTATCGACTTCA 14016 ||| || ||| | | | | |||||| ||||||||||||||||||| || || || Sbjct 88198 CGTGCGGGGCCGTGTTTCCAAGCGGACCGGCATTCCGGAAAGCTACCTCTTCCGTCTCCA 88257 Query 14017 GTACAAGACACGTGGAATGAAGGACGTGGCCGGGTCAGCGTACCGAGCGCTGATGTTGGC 14076 ||||||||| || | ||||| |||||| ||||| || || ||||| ||||||||| | | Sbjct 88258 GTACAAGACCCGCGAAATGAGGGACGTTGCCGGCTCCGCATACCGGGCGCTGATGCTCTC 88317 Query 14077 CTATGAGGATCTATGCCAGAAAAATGAGGAAGCGGCGGCCAAGCATCGCGCCGAGCGCCT 14136 || | || || |||| || || || || |||| ||| | |||||| ||| | Sbjct 88318 TTACAACGAGCTTTGCCGCCTGAACGAAGAGGCCGCGGATCGGCACCACGCCGAACGCAT 88377 Query 14137 GA 14138 || Sbjct 88378 GA 88379 >seq25291 Length=77000 Score = 354 bits (392), Expect = 3e-93 Identities = 685/1002 (68%), Gaps = 30/1002 (3%) Strand=Plus/Plus Query 24270 CGGAACGGCGTGGCGGCCGCCGGCGTCGATAAGACGATCCGCAAGACCTGGCAGGACAAT 24329 || |||||| | || || |||| ||||| || ||| | ||||| |||||||||| Sbjct 12001 CGCAACGGCATTGCTGCTGCCGCGGTCGACAAAACGGCGCTGAAGACATGGCAGGACATG 12060 Query 24330 CCGTTCCTCCTTGAAAAGGAGCGCGACGGCTCGCAGGGCAGCCAGGACGACGAAACGACG 24389 || ||||| || || ||||||||||||| |||||| || || | | ||||||| | Sbjct 12061 CCTTTCCTGCTGGAGCAGGAGCGCGACGGATCGCAGACAGGCAAGCGCAAGGAAACGAAG 12120 Query 24390 CTGGAAAAGGAAATCCGCC---AG--CGCTTCGACGATCTCCGGCTCTGGGCTCGCCTTG 24444 || || ||||||||||||| || |||||| | | || || ||||| || | Sbjct 12121 CTTGAGAAGGAAATCCGCCTCAAGTTCGCTTCCATG-----CGCCTGTGGGCCAAGCTGG 12175 Query 24445 CCGAGGCAGACCGTATGTCGATGGTCGGCGCCTATTCCGGCGTCATCCTTCGCATCGCCG 24504 |||| || ||||| | ||||||||| || | || || ||||||||||| | | | Sbjct 12176 CCGAAGCCGACCGCAAGTCGATGGTTGGTGGATACTCGGGCGTCATCCTGAGGTTGAAAG 12235 Query 24505 ACAGCAAGCGGTTCGATCAGCCCGTCGATCGCGTCAGCGGCGGCCTAGATGCTCTCGT-- 24562 |||||||| | || || |||| || ||| | || | |||||||| |||| || || Sbjct 12236 ACAGCAAGGGCTTTGACGAGCCTGTTGATAGGGTGAATGGCGGCCTTGATGGCCT-GTAC 12294 Query 24563 CGAGATCATCCCGGCTTGGGAGGGGCAGTTGCAGGTTTCGCAGTGGGACACGGACGAGAC 24622 || | |||| || |||| || |||||| |||| || | |||||||| || | Sbjct 12295 CGCATTGATCC-GGTATGGGCCGGCCAGTTGAAGGTCGCGGATTGGGACACCGATACCGC 12353 Query 24623 GTCCGAGACCTACGGCCAACCTAAGATGTTTCAGTTCAGCGAGTCCGCCGTCGAGAC--- 24679 || ||||| ||||| | || | |||| |||||| ||| | |||||||| || Sbjct 12354 ATCGGAGACTTACGGTGAGCCCACCATGTACGAGTTCAACGAAGCAGCCGTCGAAACGGG 12413 Query 24680 CAACGTCAAGCAGCCGCGCAACCTCATCATCCATCCCGATCGAGTGATCGTCTGGTCGAA 24739 |||| || | | ||| ||| |||||| || || |||||| | | ||||| | Sbjct 12414 CAACCCGAACAAAC---GCAGCCTGCGCATCCACCCTGACCGAGTGTTGATATGGTCCGA 12470 Query 24740 GGATGGCACGGTCCACGGCTCGTCGACATTGGAG---CCCGGCTACAACTCCCTGATCGA 24796 ||||| || ||| | | || ||||| || || | |||| ||| || || Sbjct 12471 AGATGGGACAGTCGAAG---CGAAATCATTGCTCTCTCCTGGATTCAACGACCTAATTGA 12527 Query 24797 CATGGAGAAGGTCCGCGGCGCCGGCGGCGAGGGGTTCTGGAAGAACGCCAAGTCGGCCCC 24856 | | |||||| || ||||||||||||||||| || ||||||||||| ||| |||| || Sbjct 12528 CCTTGAGAAGATCAAGGGCGCCGGCGGCGAGGGCTTTTGGAAGAACGCTAAGGCGGCTCC 12587 Query 24857 GGTTCTTGAGGTCGATAAGGACGCCAAGATCGACATGATGGCGAAGGCCATGGGCGTGCC 24916 ||| | || |||||||| ||||| |||||||| |||||| ||||||||||| || || Sbjct 12588 GGTATTCGAAGTCGATAAAGACGCTAAGATCGAACAGATGGCCAAGGCCATGGGGGTTCC 12647 Query 24917 GGTCGAAGACCTCGCCGACAAGATGAACGAGCAGGTCGCCGATTGGAGCGCTGGCTTCGA 24976 | | || |||| ||| ||||| |||||||||| || | |||||||| Sbjct 12648 CGCTGGTGAAGTCGCGGACCGCATGAATGAGCAGGTCGAGGACTATCAAAAGGGCTTCGA 12707 Query 24977 TAAGCTGCTCATGATCATGGGCATGGAAGCGAAGACACTGCAGGTTACCCTGCCGTCGCC 25036 ||| |||| ||| ||||||| ||| | || || | || || || || ||| || Sbjct 12708 CAAGATGCTTATGCTCATGGGTATGCAGGCAAAAAGCCTTAGCGTCACGCTTCCGAGCCC 12767 Query 25037 CGAGCATTTCTACGCCATTGCC-CTGCAGGATTTCGCGGCATCCATGAACATGCCGGTGA 25095 |||||||||| | || ||| |||||| |||||| || || || ||||||| ||| Sbjct 12768 GGAGCATTTCT-GGTCAGCGCCACTGCAGTCTTTCGCCGCCTCTGTGGGCATGCCGCTGA 12826 Query 25096 AGATCCTCGTCGGCATGCAGACTGGCGANNNNNNNNNNNNNGAAGACGCGAGCGAGTGGG 25155 | ||||| || || | ||||| || || |||||| | ||||||| Sbjct 12827 AAATCCTTGTTGGTAACCAGACAGGAGAGCGGGCGTCTACAGAAGACTCCGACGAGTGGA 12886 Query 25156 CGCAGACGAACATGTCGCGCCGCGCCAACCAGACGATTCCGAACGTCATGTCTCTGGTCA 25215 | |||||||||| |||| || ||| || || |||||||||||||| |||| Sbjct 12887 ACCTGACGAACATGGCGCGGCGACGAAACGTCACCCACCCCAACGTCATGTCTCTTGTCA 12946 Query 25216 ACCGGCTGG-AACAGTTCGGCATCCTGCCTGAGAAGGACTGG 25256 | | ||| ||| | ||||||||||| |||| |||||| Sbjct 12947 CCAGAATGGTGACA-TGGGGCATCCTGCCGCAGAAAGACTGG 12987 Score = 129 bits (142), Expect = 2e-25 Identities = 328/496 (66%), Gaps = 41/496 (8%) Strand=Plus/Plus Query 28222 ACCGGCATCTATGGCAAAGACGGCAAGGAAATGCCGGTCGGTACCGAACTTGACCTGGAC 28281 ||||||||||| ||| |||||||||||||||| |||||| | ||| ||| | Sbjct 16001 ACCGGCATCTACGGCGCAGACGGCAAGGAAATGGAGGTCGGCCATGTACTGACCCTCAAG 16060 Query 28282 GACGAGCCCAAGGGCTGGGCCGGCCGTTACGACATCATCTCGGGCG---------GCGAC 28332 || ||||| |||||||||||||| || ||||||||| || |||| |||| Sbjct 16061 GAGGAGCCGAAGGGCTGGGCCGGTCGCTACGACATCCTCGACGGCGACAGCGCCGGCGAA 16120 Query 28333 CGCAAGGGCAAGGA--AGTGCTGACCGGAG-CGGCTG------------CTGAAGGCTAT 28377 ||||| |||||| || || | | || |||| | |||||| | | Sbjct 16121 GACAAGGCCAAGGACAAGGGCGGCGCCAAGACGGCCGTCATCAACCCCGCTGAAGCCAAG 16180 Query 28378 GCC---------GTCAAGGACAAGGGTGGCGCCTGGTTCGCCATC-ACCAAG--GACGGT 28425 ||| | |||||||||||| |||| ||||| |||||| | | | ||||| Sbjct 16181 GCCCCATTCCAGGCCAAGGACAAGGGCGGCGGCTGGTGGGCCATCTATGACGCTGACGGC 16240 Query 28426 GAGGAAGTGACCAAGAGCTTCCGCAAAGCGGACGTCGAGGGCTTCGACGAGATGAGCGAC 28485 ||||||||| || ||||||| | |||| || |||| | | || || Sbjct 16241 AAGGAAGTGA---AGTCGCTCCGCAAGGATGACGCGGAAATCTTCAATGCCCTGTCGGAT 16297 Query 28486 GAGGACAAAGCTGCCTTCGTCGACTTGCATAAGAAGGACTGAGGTCCCATGGCAGGCTAT 28545 || ||||| || || ||||| | ||| ||| | | | ||||||||||||| Sbjct 16298 GAAGACAAGGCCGCGCACGTCGCAACCCTGAAGGCGGAGTAACGAGACATGGCAGGCTAT 16357 Query 28546 GGCGACGATTCCACATTCGCAACGTGGCTGACCGATAACGGGTACACTTTGCCCGGTACC 28605 || || ||| | ||| | | |||||| |||||||||| ||||| ||||||| | Sbjct 16358 GGTGATGATGCGGGGTTCTCCGCTTGGCTGGCCGATAACGGCTACACCTTGCCCGCTGAA 16417 Query 28606 GCGCCGTCGCCTGCCGTGCTCCGCAATCGCGGGAGCCAGT-ACATCGATTCCGTGTATGG 28664 ||||| ||||||||| |||||||| || || |||| | || ||| || |||| || Sbjct 16418 GCGCCAGAGCCTGCCGTTCTCCGCAACCG-TGGCGCCAATGTGATTGATGCCTTGTACGG 16476 Query 28665 CTCCCGTTTCGTTGGT 28680 |||||| || ||| Sbjct 16477 GAGCCGTTTTGTCGGT 16492 Score = 86.0 bits (94), Expect = 2e-12 Identities = 284/435 (65%), Gaps = 14/435 (3%) Strand=Plus/Plus Query 13729 CAACTGCGCCGTCCTCTCCATCGGAAGTAATGCCTGTGCGCATCAACGTCTCCTTGAACG 13788 || ||| |||| | |||||||| | || |||| || |||| | |||| | ||| Sbjct 766 CATCTGTGCCGCCGTCTCCATCAGTTTCAAAGCCTTTGTGCATGTTGGCCTCCGTTGACG 825 Query 13789 AGACCAGAGATCGCACAGGGACCGAAAAATGTACGGCAAAAGAGTTTCCAAAACCGGAAA 13848 ||| | ||||||| | ||| ||||| | ||| || |||| || || ||| Sbjct 826 CCGCCA-ACCTCGCACAAAGGATGAAGAATGTCTGACAATAGGTTTTCACGAAACGTAAA 884 Query 13849 ACCTGTTTCCGAGGCGAAGATGACAAGCGCAGCATTGACAGAGGCAAAAGGTTGGTACGC 13908 |||||| |||| | ||| | || | || || || |||| || ||||||| Sbjct 885 TTTTGTTTCAGAGGATGAAATGTCTAGTACTGCGTTAGTCGAAGCAAGAGACTGGTACGA 944 Query 13909 AGCCCTTATGGACGCAGAGTTCAAGGGGCGCGGAGATCGTGAAAAATCCGTCCGTGGCAG 13968 ||||||| | || || | ||| || || ||||||||||| || | |||||| | Sbjct 945 CAAGCTTATGGCCTTGGAATTTAGGGGCCGTGGCGATCGTGAAAAGTCTGCCCGTGGACG 1004 Query 13969 GATCGCGGACGAGACCGGTATTCCGGAAAGCTACCTCTATCGA-CTTCAGTACAAGACAC 14027 | || || | | |||| | || || | | || | |||| ||||| |||||| | Sbjct 1005 AGTAGCCGATAACATCGGTGTCCCTGAGACGTGGCTGT-TCGACCTTCAATACAAGTCCA 1063 Query 14028 GTGGAATGAAGGACGTGGCCGGGTCAGCGTACCGAGCGCTGATG-TTGGC--------CT 14078 |||| | ||| || ||| ||| | || ||||| || ||| ||||| | Sbjct 1064 GTGGCAAGAAAGATGTGCGCGGTGCGCTCTATCGAGCCCTCATGCTTGGCATCCAGAAAT 1123 Query 14079 ATGAGGATCTATGCCAGAAAAATGAGGAAGCGGCGGCCAAGCATCGCGCCGAGCGCCTGA 14138 | || || || ||||||||||| ||||||||||||| | | ||||| ||||||| Sbjct 1124 ACGAAGACCTTTGCCAGAAAAACGAGGAAGCGGCGGATCGGTACAAGGCCGATCGCCTGA 1183 Query 14139 AACTGAGGAAGGCAA 14153 ||| || | |||||| Sbjct 1184 AAC-GACG-AGGCAA 1196 >seq17619 Length=248000 Score = 82.4 bits (90), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 11/180 (6%) Strand=Plus/Minus Query 3322 TTGGTCTCGCGGTGTTCGCCGCCGAGGATCAACGC---AACCTTATGGTCGAGATCCCAT 3378 ||| | |||||||| | ||| |||||||| | || ||| ||| || || ||||| Sbjct 63723 TTGCTTTCGCGGTGCTGGCCCCCGAGGATGAGAGCGTGAAC---ATGCTCAAGCTCCCAG 63667 Query 3379 TCATCGCGCACCGGGTCGATCTTCTCG-CCGGTCAGGTGGCAGATGCCGCCCTCGCGGTC 3437 ||| | || || || || || ||||||||||||||||||||| | ||||| Sbjct 63666 ----CGCTCGCCAGGCTGAATTTTACGTCCGGTCAGGTGGCAGATGCCGTTATGCCGGTC 63611 Query 3438 GAAGACGCGCATGCGGACGCGATCGGGGACTTTCTGGTCGTCGGTCTTGCCGATCCATTC 3497 ||| |||||| ||||| || || ||||| ||| ||||||||||| |||||||| Sbjct 63610 GAACACGCGCTGTCGGACCCGTGGCGGCACTTTGGCGTCATCGGTCTTGCCAATCCATTC 63551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162375573791760