Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_031020.1
Length=163201
Score E
Sequences producing significant alignments: (Bits) Value
seq66703 226 3e-54
>seq66703
Length=1304
Score = 226 bits (250), Expect = 3e-54
Identities = 449/653 (69%), Gaps = 18/653 (3%)
Strand=Plus/Minus
Query 142087 GTAACCCATGTCTCAACATCTTCCAGAGACTTGATGTTAGGGTTAATAATTAGTTGAGGC 142146
|| ||||||||||||| |||||| |||||||| || | ||||||||| |||| |||
Sbjct 901 GTTACCCATGTCTCAATATCTTCGAGAGACTTAATTTCAGGGTTAATGTGAAGTTTAGGG 842
Query 142147 TCGTCAAAGGGCTCACGGGAGATCTGTGTCGGCACCATAGGTAATTGGTCTTCATAGATA 142206
| | | || || || | || || || | ||||||| |||||||| |||
Sbjct 841 GCTGGATACGGTTCGCGTTNCAC--GTCACG-CATTAATTGTAATTGATCTTCATAAATA 785
Query 142207 TGTGCGTTCACAATCTTAT-AGAACATTTTACCTGGCTTGTTCCGGGTGATTTGAGCCAT 142265
||||| || || ||||||| | || |||| || | || || | || |||||||||||
Sbjct 784 TGTGCATTTACGATCTTATGATAAGCTTTT-CCGGCCTCGTGGCCCGTAATTTGAGCCAT 726
Query 142266 CAGATGCAGGAATGTATACGCCTGGATTAAATCAAAGTTCAATCCTAATGGAACATCCGC 142325
||| || || ||| || | || || || ||| || |||||||| |||||
Sbjct 725 GAGAGCTAGTAAGGTAAACACTTGAATCTGATTAAAATTTTGACCTAATGGTACATCACA 666
Query 142326 CGAACGTTG--ATAAACGGTCACATGCAAAGTAT--CATGTACTAAAGAAAAAGTATATG 142381
|||||||| || || |||| || |||| | || || || ||||| |||| |
Sbjct 665 TGAACGTTGTGATGAA--GTCAAAT--AAAGCTTGCCACCTAACAACGAAAATGTATGAG 610
Query 142382 TGTGTACGCATGAACGTAAACATCCTAATTCAATTTCACCAGGGTTCCAGTAAGAAAGAA 142441
| || | || | |||||||||||| | | || ||||| || || || | | ||||
Sbjct 609 TATGCATACAAGGACGTAAACATCCCATATGAAACTCACCTGGATTGTAGAAGGTTAGAA 550
Query 142442 TTTCACCACGATCGTCGATACCCGCTGACAGGTTTTCATAGATTTTACGAAGTTGATCGA 142501
||||||| || || || ||||| | || ||| |||||||| ||| |||| || || |
Sbjct 549 TTTCACCTCGGTCATCAATACCGTTTCGCAAGTTATCATAGATCTTATGAAGCTGGTCAA 490
Query 142502 ---CTTCACCATTAGGACCAACCCAATGTCTGCCCTGTACACCATAAACCCGGCCCATAT 142558
| || || | | | ||| | ||||||||||||||||| ||||||||||
Sbjct 489 ACTCCTCTCCTACTGAATTACGCCACCTGCGCCCCTGTACACCATAAACTCGGCCCATAT 430
Query 142559 CGTCTTCACCTTTACGATTTGGGTTTTTTAACCATGCTTCATTCTCATTGGCATTAGCAT 142618
| || | ||||||||||| || || |||||| |||||||| |||||||||||||| |
Sbjct 429 CATCCTTACCTTTACGATAAGGATTAGCTAACCAAGCTTCATTTTCATTGGCATTAGCGT 370
Query 142619 TCCAAGTATTTGTACCAAGTGCCCGGAAATCTGCTGCAGACGACA-GACCACGAATATAA 142677
|||| ||||| |||| || || || | ||||| | || |||||| | |||
Sbjct 369 TCCATGTATTACATCCAATAGCTCGAAACTGAGCTGC-GCTATCATAACCACGTAGATAC 311
Query 142678 CCCAGCAGTTCGGCAATGGATGCTTTATAAAAACTTTTACGAGTGGTGTCTAA 142730
|| | | ||| || || | |||||| || |||| || ||||| || ||||
Sbjct 310 CCTAATAATTCTGCGATAGCTGCTTTCCAATAACTCTTTCGAGTAGTTACTAA 258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521610575659200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |