Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_031048.1
Length=41918
Score E
Sequences producing significant alignments: (Bits) Value
seq48527 95.1 3e-15
seq15303 80.6 7e-11
>seq48527
Length=2014000
Score = 95.1 bits (104), Expect = 3e-15
Identities = 152/214 (71%), Gaps = 7/214 (3%)
Strand=Plus/Minus
Query 35585 TTCAGGCCATCTTCCCGAACGAAAACCCGCAGTTGGGCCGTGACCGTGACTACCTGCCAG 35644
||||||||||||| || || ||||| | | ||||||| || || | | |||| |
Sbjct 1957250 TTCAGGCCATCTTTCCCGACAAAAACAACCCGATGGGCCGCGATAAGGATTTCATGCCTG 1957191
Query 35645 GCGGCCAGAAGCGTGGATGC-TTCCACGTCATCGGCAACAAGCCAACCG-GGCAGAAACC 35702
|||||| ||||| || ||| ||| || ||||||||| ||| ||| || ||||||
Sbjct 1957190 GCGGCCGAAAGCGCGG-TGCGTTCTACATCATCGGCACGCCGCCGGCCGAGGGCGAAACC 1957132
Query 35703 CGTCATTGTGGTCTGTGAGGGCTACGCCACTGGTGCATCCATTCACCAGGCTACCGGGTT 35762
|| || ||| |||||||||||||| | || | || ||| | || ||| | |
Sbjct 1957131 ----ATCGTCGTCGCCGAGGGCTACGCCACCGCCGCCACGATCCACGACGCGACCCGCTG 1957076
Query 35763 CTGTGTGGCCGTGGCATTCGATGACGGCAACCTG 35796
|| || |||||||| ||||| | ||||||||||
Sbjct 1957075 GTGCGTTGCCGTGGCGTTCGACGCCGGCAACCTG 1957042
>seq15303
Length=32000
Score = 80.6 bits (88), Expect = 7e-11
Identities = 122/171 (71%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 14880 GCTAATGGTGCGGCAGTCAGCCGAACCGCTTACGCTGACCTGTTCGCAGCGATCGGCACC 14939
|| |||||||| || ||| || || | ||||| | |||||||| ||||||||||
Sbjct 11906 GCCAATGGTGCAGCGGTCTCGCGCACGGTCTACGCGGCCCTGTTCGGCAAGATCGGCACC 11847
Query 14940 ACGTTTGGAGCAGGGGATGGGCTTACCACTTTTAACCTGCCAGATCTACGCGGTGAATTT 14999
|| | || || |||||||| ||| ||| || || ||||| || | || || |||||
Sbjct 11846 ACCTACGGTGCCGGGGATGGCGTTAGCACCTTCAATCTGCCTGACCCTCGGGGCAAATTT 11787
Query 15000 GTTCGCTACCTGG-ATGACGGCAGAGGCGTTGACTCAGGCCGCGCGCTTGG 15049
|| || || |||| ||||||||| ||| | || || || | ||||||
Sbjct 11786 GTCCG-TATCTGGGATGACGGCAAGGGCATCGATATCGGTCGGGTGCTTGG 11737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133892949859200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |