Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_031098.1
Length=40749
Score E
Sequences producing significant alignments: (Bits) Value
seq13736 125 2e-24
>seq13736
Length=290
Score = 125 bits (138), Expect = 2e-24
Identities = 186/264 (70%), Gaps = 0/264 (0%)
Strand=Plus/Plus
Query 37 GTTCAAAGTCTTGCTTGTTTTGAAACACCTCAACAAGTCGCTGACTCTGTAAAGAATACT 96
||||| |||||| || |||||||||||||||||||| ||||| |||| | | | |
Sbjct 1 GTTCAGTCTCTTGCATGCTTTGAAACACCTCAACAAGTGGCTGATGCTGTCATGCAAAGA 60
Query 97 TTCAAGGTTGAGATCGAAAGAATGCAATGTGCAAATTACGATCCAACCAAACCAACTGGC 156
|| | ||||| || | | |||||||| ||||||||| ||||| ||| ||||
Sbjct 61 TTTGGCATCGAGATTGATCGTAGGCAATGTGAAAATTACGACCCAACAAAATTTGCTGGA 120
Query 157 GAAAAAATGAGTCAGAAACTAAAGGACTTGTTTTACAGAACACGAGAAGATTTTAAATCC 216
|| | ||| | ||| |||||||||| ||| | | || || |||| ||
Sbjct 121 CGCAATCTAAGTAAAAAATTAAAGGACTTATTTGAGCGTACTCGTCAAGACTTCCGTGAG 180
Query 217 AATATCTATGACATCCCATTAGCTAATAAGGCTGTCCGCCTCAATGAGCTTCAGAAAATG 276
|| | | || || | ||||||||||||| | || | ||||||||||||||||||
Sbjct 181 AACGTTGAGGATATTGCGATAGCTAATAAGGCCTTTCGTTTGAATGAGCTTCAGAAAATG 240
Query 277 TATGAAGATTGGGGTAAGAATAAA 300
|||||||||| || || ||||||
Sbjct 241 TATGAAGATTCTGGGAAAAATAAA 264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130155584568240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |