Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq13736 125 2e-24 >seq13736 Length=290 Score = 125 bits (138), Expect = 2e-24 Identities = 186/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 37 GTTCAAAGTCTTGCTTGTTTTGAAACACCTCAACAAGTCGCTGACTCTGTAAAGAATACT 96 ||||| |||||| || |||||||||||||||||||| ||||| |||| | | | | Sbjct 1 GTTCAGTCTCTTGCATGCTTTGAAACACCTCAACAAGTGGCTGATGCTGTCATGCAAAGA 60 Query 97 TTCAAGGTTGAGATCGAAAGAATGCAATGTGCAAATTACGATCCAACCAAACCAACTGGC 156 || | ||||| || | | |||||||| ||||||||| ||||| ||| |||| Sbjct 61 TTTGGCATCGAGATTGATCGTAGGCAATGTGAAAATTACGACCCAACAAAATTTGCTGGA 120 Query 157 GAAAAAATGAGTCAGAAACTAAAGGACTTGTTTTACAGAACACGAGAAGATTTTAAATCC 216 || | ||| | ||| |||||||||| ||| | | || || |||| || Sbjct 121 CGCAATCTAAGTAAAAAATTAAAGGACTTATTTGAGCGTACTCGTCAAGACTTCCGTGAG 180 Query 217 AATATCTATGACATCCCATTAGCTAATAAGGCTGTCCGCCTCAATGAGCTTCAGAAAATG 276 || | | || || | ||||||||||||| | || | |||||||||||||||||| Sbjct 181 AACGTTGAGGATATTGCGATAGCTAATAAGGCCTTTCGTTTGAATGAGCTTCAGAAAATG 240 Query 277 TATGAAGATTGGGGTAAGAATAAA 300 |||||||||| || || |||||| Sbjct 241 TATGAAGATTCTGGGAAAAATAAA 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130155584568240