Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq2574 114 9e-21
>seq2574
Length=648000
Score = 114 bits (126), Expect = 9e-21
Identities = 181/256 (71%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 62401 GATGCCAATATTCTTTCGACTACCTCCCCTCAAAGCCATATCACGTACGTTAATCCTGAC 62460
|| || ||||| || || || ||| | | |||| |||||| || | || ||||||
Sbjct 310217 GACGCTAATATCCTCTCCACCACCGATCTCGACAGCCGTATCACCTATGCCAACCCTGAC 310276
Query 62461 TTCATTAAAATCAGTGGTT-TCA-CTGAGGAAGAACTATTAGGCCAGCCTCACAACATCG 62518
|||||| | |||| |||| | | ||||| || || || ||| || ||||| |
Sbjct 310277 TTCATTCAGGTCAGCGGTTATGAGCTGAGTGAG--CTGTTGGGCAGCCCCCACAATCTGC 310334
Query 62519 TAAGACACCCAGATATGCCGCCTGCTGCATTTGAGCATATGTGGAGTACATTAAAATCTG 62578
|| | ||||| || ||||| | || || || ||||||||| || | || | |
Sbjct 310335 TACGCCACCCCGACATGCCTGCCGCGGCCTTCAGCCATATGTGGCAGACGCTCAAGGCCG 310394
Query 62579 GCCGCTCATGGATGGGGCTAGTAAAAAATCGCTGTAAAAATGGCGACCACTATTGGGTAA 62638
| ||||| ||||||||| | || ||||| ||||| || ||||||||||| |||||||| |
Sbjct 310395 GACGCTCCTGGATGGGGATGGTGAAAAACCGCTGCAAGAATGGCGACCATTATTGGGTTA 310454
Query 62639 GTGCTTATGTAACGCC 62654
|||| || || |||||
Sbjct 310455 GTGCCTACGTCACGCC 310470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330587381275120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |