Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_031933.1
Length=114180
Score E
Sequences producing significant alignments: (Bits) Value
seq66703 205 7e-48
>seq66703
Length=1304
Score = 205 bits (226), Expect = 7e-48
Identities = 449/669 (67%), Gaps = 18/669 (3%)
Strand=Plus/Minus
Query 51626 TGATCTTCATAGATATGAAGATTAATAATCTTTTGACGAGCAATACCTGGCTTAAGACCT 51685
||||||||||| ||||| ||| | ||||| ||| ||| | || | || | ||
Sbjct 799 TGATCTTCATAAATATGTGCATTTACGATCTTATGATAAGCTTTTCCGGCCTCGTGGCCC 740
Query 51686 GTAATCTGTGCCATAATAGCTAGAAGTGCATAGCATTGCACCATATTAAATACTTGGCCC 51745
||||| || ||||| | |||||| | | | | ||| | | |||||| ||| ||
Sbjct 739 GTAATTTGAGCCATGAGAGCTAGTAAGGTAAACACTTGAATCTGATTAAAATTTTGACCT 680
Query 51746 AGCAAGAAATCATTAGACCTCTGGAAAGAGTTTAGGTATAGTGTATCACCTAAAATAGAG 51805
| | |||| || | || | || | | || || | ||||||| | ||
Sbjct 679 AATGGTACATCACATGAACGTTGTGATGAAGTCAAATAAAGCTTGCCACCTAACAACGAA 620
Query 51806 AATTGATGGGTATGCATACACGGACGTAGGCATCCTTTACGAAATTCCCCAGGGTTCCAA 51865
||| ||| ||||||||||| ||||||| ||||| || |||| || || || || |
Sbjct 619 AATGTATGAGTATGCATACAAGGACGTAAACATCCCATATGAAACTCACCTGGATTGTAG 560
Query 51866 AAAGTTAAAATTTCTCCACGATCGTCAATCCCTCTTTTCAAATTATGATAGACTTTGGCT 51925
|| |||| |||||| || || || ||||| || || ||| |||| ||||| ||
Sbjct 559 AAGGTTAGAATTTCACCTCGGTCATCAATACCGTTTCGCAAGTTATCATAGATCTTATGA 500
Query 51926 AACTGATCAAATACCATACCATCAGAATTAGTCCAATGACGTCCTTGAACACCATAGACT 51985
| ||| ||||| || || | |||||| ||| || || || |||||||| |||
Sbjct 499 AGCTGGTCAAACTCCTCTCCTACTGAATTACGCCACCTGCGCCCCTGTACACCATAAACT 440
Query 51986 CGTCCCATATCATCCTCGCCTTTACGGAATGGATTACCTAGCCAGGCAATATTTTCATTT 52045
|| ||||||||||||| |||||||| | |||||| ||| ||| || |||||||||
Sbjct 439 CGGCCCATATCATCCTTACCTTTACGATAAGGATTAGCTAACCAAGCTTCATTTTCATTG 380
Query 52046 GCATTAGCATTCCATGTATTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCGTACCCA 52105
|||||||| |||||||||||| |||||||| || || || ||||| || || |||
Sbjct 379 GCATTAGCGTTCCATGTATTACATCCAATAGCTCGAAACTGAGCTGCGCTATCATAACCA 320
Query 52106 CGGAGATATCCGATCATTTCCATTATTGCTTGTTTAGCAAATGCT-TTACGAGTAGTTAC 52164
|| ||||| || | | ||| || || || || ||| || || |||||||||||
Sbjct 319 CGTAGATACCCTAATAATTCTGCGATAGC-TGCTTTCCAATAACTCTTTCGAGTAGTTAC 261
Query 52165 TA--GCG-GCAGT-----------TCTCCT--GCTCCTACGTTAAAGGTAAAGTCTGCAT 52208
|| || | ||| ||| | || |||||||| | || || ||||
Sbjct 260 TAAGNCGAGTAGTCACTAAAGGAAACTCATTAGCGCCTACGTTGTATTCTAAATCAGCAT 201
Query 52209 CAATAATGGTTAGGCAACGAACCCCTGTTCTAGGATTCGTTACCCATACACCCTCTTCAA 52268
||||| ||||| |||||| || || | |||| |||||||||||||| ||||
Sbjct 200 TAATAACGGTTAAGCAACGCTTTCCAGTCCGTTCATTCTCGACCCATACACCCTCATCAA 141
Query 52269 GAATACGTT 52277
|||||||
Sbjct 140 CTATACGTT 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 364907010097320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |